Clone Read LE_HBa0075A23_T7_84909

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0075A23_T7_84909
Primer
T7
ID from Seq. Facility
LE_HBa_075_A23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1269 raw
Sequence
>LE_HBa0075A23_T7_84909 (raw untrimmed)
ACGTGCGCAGATACTAGCACATAATAGATTGACAGTGTGATAGTCCAGACTACGTAGGAGACGAGTGAGAGAGGGAGTCCTCTTATTCTACTGTGGCGTG
TCTGTCTGCTATAGGGAGACNGTATTCGGTGCNCCAGCATTGTATCTCCTCACTACNTTAGTCACGCGAGGAAACCCGAGTCTCTTGCTGAGCGAGCGCG
NCGAGCATGCATACTAGCATGAGANTCCGAGAGAGCAGTGTCATTTNTGTGACATGTACGNCTCACGCTNACGACAAGGCNCGTTACTGCTNTGCGGATC
GATGTCATTTNTNAGATAGTTATATGTATCACATCATGAGCANTNANTAATGAACATGGTAGGACAGACACTGATGTATGTGACTATCATNAGGACTTAN
ATGAGTCTACTCATATCTGTNCTGTGTCTCTCTGATGATGTGTATCATGTNGCGCAGATAGATGATGTGAGACTGAGTGGGCTGACTGCATGCGCTGACG
TACGTTGAGGCTTGTGGAGCGCTNGCGGATGNGCTNTGATCAGATATATGGCTGTCTGCCGGCACNTCTGAGTGATGTATGTGTGACATGTGTGTTACCT
ATGATACTTACACATATGATGTAAGCTGACGTNTTCGGAGACCACTAGCTNANCTATTCACTTATATCTTCTCCTCATGTNTTTGCTATGAGAGCATGAT
ACAGCGGTATCACGATGCGCGAAGTGCATGACAATCACTACTCATGCTACTGGCGCTATCATCTATGCTGATCGTGATGGAGACGAAGACGATAAGATAA
GTAACACAACTTGCTAGCGTCGGTGNANGAGTCGACTTGACATCGAACGTCTGCTACATCTGTGTCAGTATGCGTACGGCCCTGACTACAATAANGTAGT
GAAGATACTGTGAAGATGAGACATTGACAGATGACGCATGGTACGTGATTGCACATATGTAGTAAGTGTTGTATGTGATGGTAAATATGGCGTCTGTTCA
GCANGTCANATGACGTCAATCTNGATANTGACGAACTATGGTACGGGTAGANCGGANGACTGATCGAACCCAGGCAGTATATACAAAATAAGCTGTGAGT
GTATCGGACTTGGACATCGGCATCGAGCGGGCACGCACGGAGTAGCCGGGCACTCCTACTGCCGCGCATCACGGCGAGATGGTATACCATGATGATATGA
TATCACCTCTTCTTCTACTGAAGATATCTGCAAGTTGGTGATTGTTCTAATGTGTACGAGAATGAGAGA
>LE_HBa0075A23_T7_84909 (trimmed for quality and cloning vector)
GA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.35384
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0075A23
Clone
Clone name
hba-75a23
LE_HBa0075A23
P075A23
Clone type
BAC
Contamination
none
Estimated length
113,711
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found