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Clone Read LE_HBa0072A06_SP6_84106

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0072A06_SP6_84106
Primer
SP6
ID from Seq. Facility
LE_HBa_072_A06-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
592 trimmed for vector and quality, 929 raw
Sequence
>LE_HBa0072A06_SP6_84106 (raw untrimmed)
AATGATTATTGGGTTTCCGGCGCTATGGAAGTGACCTACCATTTATATAATAATTGTATTTTATATCTTTTTCAATTGGACCCTCATATTCTCTCAAACA
CGTTTGTCTCTTTGGTCCAATTTTGTCATTTATGTCGATAGTTTTTTCTTTAAAAATCAGTATTATATTTCTGCCCTCCTTTTAAAGTAAGTCTTATTTT
ACTAAAAACAATATAATAATTATTGCTTTAACATTTAAAACAAAAATTTACAATTATTTTTAGTTATATCATTACGTTAAAGAATTTTTTTCAATAGTTC
TTCCCAATGTTTAAAATATATAATAAATAAATAGAGGTAAGTAACTACGCAAATGATAGTATCTTATATTTATTATTATATTTTTTAATGAATTTGAAAA
AAGCTAAAATGATAATTAAGTAGTTCATGTATATATATATAGTAGCCTCCAACGATGTGATTGTGAAAGGTCGACATGAAAGAAAACTACTAATGATAAT
TATTGTTACTATAAGTCAAATCCATGAGCTAACTATCATTAATTAATTAGTTAATTTACTATTATTGAGATCTAGCTCTTCCCACTTTTTGTTTTGTTAT
ATAAAATTTAAAATTTATGAATTTTAAATTTTAATGTTTAAAATTTTAAATTAATATTTCGTAACATATTCTTAAGACAAAATAAGATAAAGAACCCAAG
CTATTAAATTTTGTTAATCCGAACTCGTAAGCTAACTTTTTAGCTTTGCTTGAATAGCGAGGGGATATAGTACTTGGAAGTCCCTTCCTAACCTGCGTAA
GGTAAGGGAAACCTGTGCCTTCTCCCGAAAATTTAAAGCGTCCTCCTCTGGTTAAAAAGGTTTTTTGATTCCAAACAAAATTATTGGTCCAGGAAATTAG
ACCCAGATATGTTTTTTATGACTCGAACT
>LE_HBa0072A06_SP6_84106 (trimmed for quality and cloning vector)
TTTATATAATAATTGTATTTTATATCTTTTTCAATTGGACCCTCATATTCTCTCAAACACGTTTGTCTCTTTGGTCCAATTTTGTCATTTATGTCGATAG
TTTTTTCTTTAAAAATCAGTATTATATTTCTGCCCTCCTTTTAAAGTAAGTCTTATTTTACTAAAAACAATATAATAATTATTGCTTTAACATTTAAAAC
AAAAATTTACAATTATTTTTAGTTATATCATTACGTTAAAGAATTTTTTTCAATAGTTCTTCCCAATGTTTAAAATATATAATAAATAAATAGAGGTAAG
TAACTACGCAAATGATAGTATCTTATATTTATTATTATATTTTTTAATGAATTTGAAAAAAGCTAAAATGATAATTAAGTAGTTCATGTATATATATATA
GTAGCCTCCAACGATGTGATTGTGAAAGGTCGACATGAAAGAAAACTACTAATGATAATTATTGTTACTATAAGTCAAATCCATGAGCTAACTATCATTA
ATTAATTAGTTAATTTACTATTATTGAGATCTAGCTCTTCCCACTTTTTGTTTTGTTATATAAAATTTAAAATTTATGAATTTTAAATTTTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.867917
Expected error %
0.405115
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0072A06
Clone
Clone name
hba-72a6
LE_HBa0072A06
P072A06
Clone type
BAC
Contamination
none
Estimated length
113,274
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found