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Clone Read LE_HBa0069J01_T7_83761

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0069J01_T7_83761
Primer
T7
ID from Seq. Facility
LE_HBa_069_J01-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1281 raw
Sequence
>LE_HBa0069J01_T7_83761 (raw untrimmed)
GCCGCACGCCGGCCGCTGTCTCCTGGTGCTAGTGACGTCCATACCCGTCTAGGCTCTGAGAGCGGGGGAGGCTCTCCCTCTCCCTCCCACAGCGCGACGG
CGCGCGTCGCGCGGCGGAGAGGGAGCAGACTACATCNAANACNGATAGATNTGCTANGTGTGAGNTGTGCTTTCACAACAAGAGCGCTCAGATCCATGGA
CAATGCTCTCCACCGACAACGACAGGCACCGTGTGGTCATGTGCAGTAGAAGCATCCAAATATAGTACTATGCTGCGTCATGACAGTTATCCNCATACAC
TTTAGTGCGATGATGCCTGGAGTGCGCGCACAGAGCTTCGACGCAACCCAGTAACTGCTCTACTTCGCTGTGTCGCACTCTGACAAATCTCTGCGTGTGT
GATATGCGTGAGGCGATGCGAATCGACATTGTGTGTGATATTGCGATTGCTTATGATGTGTGTCTGAAATCTCGTTGCCTATCGTGTGTGCACGCGAACG
GCTATGTCCACTCACGATATCNAGATGATAAGACGAAACTCCTGTGCGGTGAGTATAGATCGAGCCTCACACACGCTCATTTGCCTCTAATCCGCTCAGT
TCTCTATGCTACGTCCTTTATCTCTCTCGCCAGTTGTCGTCGCGCACACACTACTTGACGTGCGCGCTNATGGCCGCGTGATCGCTGGTGNACCGCTCAC
GTATGTCNGAGGCGNCGCACGTCCGATGCTGGAGTAGTGCGTAACTCGGATNCAGATAGAGAACNGACATAGTGTGANGTGATCTACTACTTNCANTGCT
ACTANAGACTACTGACTGNTGGATTACCTACGACCTCAATTTGTNTCACGNGTGNANGTCATGTATATTCGNGAGTCGAGTCNTNATCTCGGGTAATGTA
ATAGTACNGTGATCCTCTACNATGACAAGTCGTACTCATNAACACACGTGTACCGCTGTACTNGATCTGTAATGTAGAATGTATGAGGCTGACTCCACGA
CTGTCGNGAGTATGATGAACACATCTCGACAAGTNGACATATATAGTGTCATACTATCGAGAGATCGNTATGCTGCTCGNGTANACGCGTCTATCTAATA
GTGATCGCTAGTATCCACTGCAGATTATCNGTGACTGATAGCTCANANCGCCACGCTCNTACAAGCAGNACACTCGTAGCTCGANCTGACACTGCTGNAC
ATGCTGCGNCGGCTGACTTGTGACAGACGGTCTGGACGGGGAACGACCTCGNACANGAGAGTGGGAGCAACTGACACACAT
>LE_HBa0069J01_T7_83761 (trimmed for quality and cloning vector)
GC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.23403
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0069J01
Clone
Clone name
hba-69j1
LE_HBa0069J01
P069J01
Clone type
BAC
Contamination
none
Estimated length
76,260
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found