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Clone Read LE_HBa0069A04_SP6_83334

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0069A04_SP6_83334
Primer
SP6
ID from Seq. Facility
LE_HBa_069_A04-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
631 trimmed for vector and quality, 891 raw
Sequence
>LE_HBa0069A04_SP6_83334 (raw untrimmed)
CCGGCCTTAGTCGAAAAACATCCCTTTTTTTCATTAATTAATATTTTTAAAAAAAATTGACATAACATATTTAAGTCTATGAAATTCAAAAAATATTTCT
CATGTATCCTACAAATCAAACTCATAATTAACTAGAACTTTACAAATTAGTTAACATGTATTTCACGCAAATTGTCACATAAATTGAATATATTTATTTA
TTTTATACACATTTAAATACTTATTTAACGACTTATGCACATCTATTTTTTTAAATGTCGATATCAATTGACACTACACCTCATTAATTAATGCTATTTA
TATAATTTTTAAAGACAATTAACATTTTTTTTATAATATATTTAAAGTTATAGAGATATTAAATTTAATAACATTTAATTCATATTAATAAAAATAATAA
TATTCTTTATCCATCAACATATTTATTATCACTAAAAATATTTTTATTATAATAATATGTTAAATTATATAAAATATTCACATTACGTCGCCTATAAACT
TTAAATATTAATTCCGCTTTTAAAAAAGAAAATTTGGAAAAAGAGTCCCAATAGTTAACAACTTTTCATACTGCAAAAGAAAAAAAAAACTTAGATCTAA
TCCACCGTCACTCTCTCTGTCCCTCCATTTATTCTCTGCAGAAAAACACACACACACAGTCTCTCTCACGCTCTCTCAACATATTCATTCCCTTTTTGTA
GTATTTTTCTCCCCATTTACATCTCCAGGGAACTCGTAGTTGGGTTTCCCTCTCATTATTCCAATTAAAATTTGTAAGTTTTCTGGCTTTTTTTTGATCG
GATTCAATTTTTGGTCACCCATAAAGGTGTTTGAATGGTGTTGAGGCGAGTGGACTCATACCCAATTACAAAAGCACCTTGGTAGAGGAAC
>LE_HBa0069A04_SP6_83334 (trimmed for quality and cloning vector)
TTAATTAATATTTTTAAAAAAAATTGACATAACATATTTAAGTCTATGAAATTCAAAAAATATTTCTCATGTATCCTACAAATCAAACTCATAATTAACT
AGAACTTTACAAATTAGTTAACATGTATTTCACGCAAATTGTCACATAAATTGAATATATTTATTTATTTTATACACATTTAAATACTTATTTAACGACT
TATGCACATCTATTTTTTTAAATGTCGATATCAATTGACACTACACCTCATTAATTAATGCTATTTATATAATTTTTAAAGACAATTAACATTTTTTTTA
TAATATATTTAAAGTTATAGAGATATTAAATTTAATAACATTTAATTCATATTAATAAAAATAATAATATTCTTTATCCATCAACATATTTATTATCACT
AAAAATATTTTTATTATAATAATATGTTAAATTATATAAAATATTCACATTACGTCGCCTATAAACTTTAAATATTAATTCCGCTTTTAAAAAAGAAAAT
TTGGAAAAAGAGTCCCAATAGTTAACAACTTTTCATACTGCAAAAGAAAAAAAAAACTTAGATCTAATCCACCGTCACTCTCTCTGTCCCTCCATTTATT
CTCTGCAGAAAAACACACACACACAGTCTCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.85138
Expected error %
0.111129
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0069A04
Clone
Clone name
hba-69a4
LE_HBa0069A04
P069A04
Clone type
BAC
Contamination
none
Estimated length
101,292
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found