Clone Read LE_HBa0060L11_T7_83109

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0060L11_T7_83109
Primer
T7
ID from Seq. Facility
LE_HBa_060_L11-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
7 trimmed for vector and quality, 766 raw
Sequence
>LE_HBa0060L11_T7_83109 (raw untrimmed)
ATTTTCATTTGTTCCGCGTGTACATATAAGGGGGGCCCCCTTGCGAGGGTATCTCGAATCCTACAATTTTTCTTAGTAAGCTTTGTTTCGTTCGTCTTAT
ACATAGGACGGGTAAGATGGACACCAGTTAATATGCAGGTCAACCAATCGGGGAAATGTGATTATATGACGAATATGTTCCGTCCTGTTGAACGTGTATG
TTGACTTCCGCACCACAGTCTAGTGGTATTATACCTCAGCACTTAAAGAAAGGTTGGTTTCATTTCTCCCCCTACATTTGATAATATACCATCTCATGGA
AAACTCTTTATTTTGGTCTTTCTGAAATAATCACGACTCCACAATAAACTATATTTTGTATCCAATTACAATACTAAAAAACCTTAACTTAAATTAAACA
CTCATAGTTCTGTTGCTTTTTCGCTCTTGCCTGCTGTTCTTCGTTCTTGATCATTTTTTTCTTTCTGTTTCGTTATTCTTTCATTTTCTCTCTCTCATTA
TTTATGTATCTTTCTTTAATTCCAATTTTAAATAATGCATTGACAAACATCTCAATTCTCAGCGTCATATCTTATCCCTACTCAATCTCTCGAGTTTCAC
CCGTTTAAATTCGTCGTCTAATTTTGTCTCTTGCCTATTCGTTCTCATCTTTACCTCTCGACTACTCCATGTTCTACTCTTCCACCCTCTCAATTCCACC
CATCCACCGTGTGTCCACTACACATCCCCTCCTCCCACCCCCCTCCCTCTCCGCCCCCACTTTGCC
>LE_HBa0060L11_T7_83109 (trimmed for quality and cloning vector)
TCAACCA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.307573
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0060L11
Clone
Clone name
hba-60l11
LE_HBa0060L11
C12HBa0060L11
P060L11
Clone type
BAC
Contamination
none
Estimated length
120,120
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found