Clone Read LE_HBa0040F02_SP6_8306

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0040F02_SP6_8306
Primer
SP6
ID from Seq. Facility
LE_HBa_040_F02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
706 trimmed for vector and quality, 764 raw
Genbank Accession
Sequence
>LE_HBa0040F02_SP6_8306 (raw untrimmed)
AAATTGTCTTTTTGCACATTAGGTTAATTCATAAAAGTAAAAAAATCAAAATTATTCTTAAACTATGTGAAATAGATCACTTATATCATTCGTTACATTT
TGAAATAAAAAATGCCCCTGCTGTTATCCTAAGAGGTCACCTATACCCTCAAGAGTTAACACCCCATATTTTTATTGACTTGGCAAGCCACGTGGGATTA
ATCTTTCCACCTAAGCATTGCCAACTAGGATTCATACAAAAGAACTAGACCTATCGCCACAAAAGCCCAAAAAATTGTCACGAAAAAATTTAACATTAAA
TTCTAATTTTGTTTTTTTTCTTCATTATTTAAAAAAAAATAATATCGATTAAGTAGAAATTTGAAGACACTACATGTTTTACTTTTATGTTATATGCAAA
TGTAATAAAATGTATAATTATGCATTATATAGTAGGAAATTTGAATCAAGATGTAATTTTCATCATTTTTCATAATAATATTAGGTGTTTTTAATATTAA
TGTTGCAAGTTATTTATTTTAGAAAATTAGGTTGCAATCGAAAAATAATTATCATATATTTTTTGTTTAAAAAATAGATTTTACTATTAGTCGTCACTAA
AAATCACTCATAACCTTTAGTGACAATTTATTGGGCTTTTGTGGCGACTATTGTCGCCTCTAAAGGTCTAATTCTTTTGTAATGAATCCTACTTGACAAT
ACTTAAGTGGAGGGATTAGTCCATGTCACGTCACCAAAAAAATTGGGGTGCCAACTCTTGAAGG
>LE_HBa0040F02_SP6_8306 (trimmed for quality and cloning vector)
TAATTCATAAAAGTAAAAAAATCAAAATTATTCTTAAACTATGTGAAATAGATCACTTATATCATTCGTTACATTTTGAAATAAAAAATGCCCCTGCTGT
TATCCTAAGAGGTCACCTATACCCTCAAGAGTTAACACCCCATATTTTTATTGACTTGGCAAGCCACGTGGGATTAATCTTTCCACCTAAGCATTGCCAA
CTAGGATTCATACAAAAGAACTAGACCTATCGCCACAAAAGCCCAAAAAATTGTCACGAAAAAATTTAACATTAAATTCTAATTTTGTTTTTTTTCTTCA
TTATTTAAAAAAAAATAATATCGATTAAGTAGAAATTTGAAGACACTACATGTTTTACTTTTATGTTATATGCAAATGTAATAAAATGTATAATTATGCA
TTATATAGTAGGAAATTTGAATCAAGATGTAATTTTCATCATTTTTCATAATAATATTAGGTGTTTTTAATATTAATGTTGCAAGTTATTTATTTTAGAA
AATTAGGTTGCAATCGAAAAATAATTATCATATATTTTTTGTTTAAAAAATAGATTTTACTATTAGTCGTCACTAAAAATCACTCATAACCTTTAGTGAC
AATTTATTGGGCTTTTGTGGCGACTATTGTCGCCTCTAAAGGTCTAATTCTTTTGTAATGAATCCTACTTGACAATACTTAAGTGGAGGGATTAGTCCAT
GTCACG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.912023
Expected error %
0.14573
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0040F02
Clone
Clone name
hba-40f2
LE_HBa0040F02
P040F02
Clone type
BAC
Contamination
none
Estimated length
46,985
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found