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Clone Read LE_HBa0055M05_SP6_82376

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0055M05_SP6_82376
Primer
SP6
ID from Seq. Facility
LE_HBa_055_M05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
496 trimmed for vector and quality, 804 raw
Sequence
>LE_HBa0055M05_SP6_82376 (raw untrimmed)
TGCTTTCGATCTTGGAGGACGTTATTTAAAATTTTGTGTATAGAGGAAGCAGAACTGAGTCACTCATCCTTGTATCAAGCAAAGTTGCTCGCAGAAAATT
CTACATGCCATGGGCTTTGCAGTCTAGAAATGGATGGGAAGTCTCTAATTATTAAATGGAAGGGAACCCCAATTAAGTCACTTTCTGCATGGAAGTTCCA
CCAATAAGATAGCTTTTTATTTTGTTTTTATGAGGTTGTTCCTCTTGTTTTGCTCATGTTTTTTTGGTTACAACGTCCGGTCTACTAGTGATGTTGTCCA
TTTTGGGTCTAGGTCCATACAACAAACATCAAACAATTTCTGTTGCAGAGTGAGAGAAACCTTCTCTTAGGGGAGTAATATATATATGTGAGGTAGCCAT
ATGGTACTAGTAGCCTTGAATATAATAATAATGATTAGTTTTTCTTAGGCTATAATGAAGTTAAAAGAGTTATGTTTATTCTCATGGATCATATCACATC
ATATCATATATTATTATAAGAGGGAACCAAATAAGTTTAAATTTTAATTACTATTTTACCCTTATTATAAATGAAAACGGTATATTATTATTGAATTATT
TTAGTTTAAAATAATTATATTGTATTAATGAAATCGAAAAATAAGAAATGACTTTACTCACTTCGATTGTTTTATTTCAATAACAAATACATTTTTACTT
TATTTATAGCTTGCTTATCTCTGTTACTTCACTCTTAAGCTCATTTCTTTATTATTGATCTCAATCTATCTTTTTAATTTACTTCTTTATTATATTATAA
TCTA
>LE_HBa0055M05_SP6_82376 (trimmed for quality and cloning vector)
TTTTGTGTATAGAGGAAGCAGAACTGAGTCACTCATCCTTGTATCAAGCAAAGTTGCTCGCAGAAAATTCTACATGCCATGGGCTTTGCAGTCTAGAAAT
GGATGGGAAGTCTCTAATTATTAAATGGAAGGGAACCCCAATTAAGTCACTTTCTGCATGGAAGTTCCACCAATAAGATAGCTTTTTATTTTGTTTTTAT
GAGGTTGTTCCTCTTGTTTTGCTCATGTTTTTTTGGTTACAACGTCCGGTCTACTAGTGATGTTGTCCATTTTGGGTCTAGGTCCATACAACAAACATCA
AACAATTTCTGTTGCAGAGTGAGAGAAACCTTCTCTTAGGGGAGTAATATATATATGTGAGGTAGCCATATGGTACTAGTAGCCTTGAATATAATAATAA
TGATTAGTTTTTCTTAGGCTATAATGAAGTTAAAAGAGTTATGTTTATTCTCATGGATCATATCACATCATATCATATATTATTATAAGAGGGAAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.950127
Expected error %
0.455673
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0055M05
Clone
Clone name
hba-55m5
LE_HBa0055M05
P055M05
Clone type
BAC
Contamination
none
Estimated length
117,841
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found