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Clone Read LE_HBa0040B04_SP6_8118

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0040B04_SP6_8118
Primer
SP6
ID from Seq. Facility
LE_HBa_040_B04-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
648 trimmed for vector and quality, 773 raw
Genbank Accession
DU027366
Sequence
>LE_HBa0040B04_SP6_8118 (raw untrimmed)
TTTTTTTGGTTTATCCGCTTTTTTAGGAGATAAAAAAAGTAAATCACCCTATGCTTTCAACATATAGTGTAATCCCAATGATACTACTTTGTATTAAATT
GCTCAGGTTGTAAGCTTGAATAGTAGCTAATGGTTTCTCTTTATCTTAACAGGCTATATATGTGTTTCTCTATAATTTTATCCTTCTTTTAGTAAGATTT
GCTATAGCTCACTTGATATATACTTAAACACATAATAGTAACCAACAAACTCTTAACACTTATTGTGTGATATTTACTGATTGATGAAACCTCCTCATAA
GAAAATTAATTTGTCTTCTGCGTTATTTCTGTTGGTGTGTTGATTATTGAAATGGTTGTGTTTTAGGTTTATATTACATGAGGTTAATCAAAGGAGTGGT
GAGTCTTACGTATGTATGTACAGATTTGGCCTTATCATTTTTAGTTGCTTCGTTTATTTCTTTCGATTAAGTCATGCTTATAACAGCTAAGAAACGTTGA
CAATTGTGTTTCAAACAAAACCTATAATACATAGTATTACCATAGATGTCTGCAATATGAATTTAGGTCCAGCTAGAAAGAATGATCTATGTAAAAGGAA
TTATGAGGCTAGAAAAAAATAGAAGAGATTCTACTTATTAAGTTGCTTACAGTCTGTATGGATAGTATGACTTGAAAACTTTAGTCTTGGTATTGAATTT
GGGTAAGCTTTTCTCTTCAGAATCATTGGCTTCTTTTTCTTCCCCAATTTCGTTATTCGTAACAAACAGATTT
>LE_HBa0040B04_SP6_8118 (trimmed for quality and cloning vector)
AAAAAAAGTAAATCACCCTATGCTTTCAACATATAGTGTAATCCCAATGATACTACTTTGTATTAAATTGCTCAGGTTGTAAGCTTGAATAGTAGCTAAT
GGTTTCTCTTTATCTTAACAGGCTATATATGTGTTTCTCTATAATTTTATCCTTCTTTTAGTAAGATTTGCTATAGCTCACTTGATATATACTTAAACAC
ATAATAGTAACCAACAAACTCTTAACACTTATTGTGTGATATTTACTGATTGATGAAACCTCCTCATAAGAAAATTAATTTGTCTTCTGCGTTATTTCTG
TTGGTGTGTTGATTATTGAAATGGTTGTGTTTTAGGTTTATATTACATGAGGTTAATCAAAGGAGTGGTGAGTCTTACGTATGTATGTACAGATTTGGCC
TTATCATTTTTAGTTGCTTCGTTTATTTCTTTCGATTAAGTCATGCTTATAACAGCTAAGAAACGTTGACAATTGTGTTTCAAACAAAACCTATAATACA
TAGTATTACCATAGATGTCTGCAATATGAATTTAGGTCCAGCTAGAAAGAATGATCTATGTAAAAGGAATTATGAGGCTAGAAAAAAATAGAAGAGATTC
TACTTATTAAGTTGCTTACAGTCTGTATGGATAGTATGACTTGAAAAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.931888
Expected error %
0.271367
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0040B04
Clone
Clone name
hba-40b4
LE_HBa0040B04
P040B04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found