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Clone Read LE_HBa0016P11_T7_79461

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0016P11_T7_79461
Primer
T7
ID from Seq. Facility
LE_HBa_016_P11-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
161 trimmed for vector and quality, 763 raw
Sequence
>LE_HBa0016P11_T7_79461 (raw untrimmed)
CAAGGGGCAGAATTTAACTCCGGGGACCCGCTGTTCTTTGACGGACCCTCAATTCGGCATTCGTACTAATCACTCGATCGTGAACCTAGCAAGTTCGGCT
GTTCATTGGTTGACTGCTTGTCCTAAACACCGCGAATTCAAATCCATTTTGCCCTGCTTTCACTGTTGAGGCATAGTACTGAGGGACTACAAACATTTCT
CCTTGATTTACCCTGTCATTCATCACTTGTTGCCCGGTGTGGTCTACTACCTGCACTTGTGCATCTCCTCTTTGCACGTAGATCACGCTGTGTTCATTCA
CTGACCAGTGAGGGCTCATCACTGCGTTCTGCAATCCACCAATTTTAATCCTTTCCTAGTCAATAGTACTAGAAGAACTATTTTTCTTTTATTTTTGATC
AACTTATAAATAACACTGACTGAATTATCCGGATATAGGGCTCCTCTTAGACGCACTCATGTCCATGTCTCTAAAGATGGCACTATTTTGGCTATTAACA
TGCTAAACCTTGCCACCTTCGCCTGAAGCCATATCAACTCGACTTTGAGTATCCTTGATCGCGCGCATTTCCATAGACAGATGTCTTCTTCCAAGCAATT
CCAGCTACTCTGCCCACCACGCTGTCCTCGTGTGAACCCCCTCTACTCCTCTTCTTCTTATCACACCAACTGCACAACCTTCCTGACTATACAATAGCCA
CTTCTTTCGTTCTTCTACTCCTCCAACATCTCTCGAGATTAGAAGCCCTCCCATCCCTCTTGT
>LE_HBa0016P11_T7_79461 (trimmed for quality and cloning vector)
TTGTCCTAAACACCGCGAATTCAAATCCATTTTGCCCTGCTTTCACTGTTGAGGCATAGTACTGAGGGACTACAAACATTTCTCCTTGATTTACCCTGTC
ATTCATCACTTGTTGCCCGGTGTGGTCTACTACCTGCACTTGTGCATCTCCTCTTTGCACG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.929568
Expected error %
0.439171
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAD42944.1| Score 90 E Value 2e-17 Identity 25.80% Align. Length 158bp (98.14%) Frame 3
11S globulin precursor [Sesamum indicum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAF19607.1| Score 80 E Value 2e-14 Identity 22.60% Align. Length 158bp (98.14%) Frame 3
legumin-like protein [Perilla frutescens]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0016P11
Clone
Clone name
hba-16p11
LE_HBa0016P11
P016P11
Clone type
BAC
Contamination
none
Estimated length
131,550
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found