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Clone Read LE_HBa0016F10_SP6_78978

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0016F10_SP6_78978
Primer
SP6
ID from Seq. Facility
LE_HBa_016_F10-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
728 trimmed for vector and quality, 896 raw
Genbank Accession
DU061978
Sequence
>LE_HBa0016F10_SP6_78978 (raw untrimmed)
CCACGGGTTTGTTTTGTTAGACCTTTAAGGGCCAGGTTTAGTGTTTAAAGTTTGAATTTTTGTTGATTTTAAGCTTGATTTTAAGGTGAAAAAAGGGTTC
TTTTTAATGTAGGTATAAGCCGGAGATTGGTGATATTATAGTCGGCCGCGTTATTGAGGTGAGTCTGATTCCCTGCAATGAGTTTCTTGTCAAGTTTGCT
TCTTTCATGTTTAGGTGTTTCATTTGCTGCTAGCTCTTACATCGGTTTCTTCCAAAAATATTGAAAATTGAGTAATCTTTGCTCCTTTTATGTTTAAGTG
CTTATAATTAGAAGTTTAATGCTAGTGTATGGACAATTTGTTTCTAGTTGATTGAATCGGTATTTTTGGGTAGTACTGTAGTAGTTAGAAACCTCAATTG
ATACGAAAGTCGAAACCTGTTGCAATGGTAAAGTTGCTCTCTTTAGTGACTGGTAGGTCATGAGTTCAAGGCTTGGAATCAACTTATTTTCAATCTACCA
TTTTCCCCTTACCATGCCTAACCCCGGGAGCATCTTGTTCAAAGTTCACTTAGCAAAATGCAACTCTCTCCTAATGTATCCCCAGGTAATTGTAAGGGAT
AGGATAGAGAGTTAAATTATTTCCGCTGCTCTTCAGGTTTTCCTAGTATGATCATAAATTCATAATAGCGTGGGATTTTTCACTCTACCATTTGTTAGAG
AAATATATTAGCCTTCACATTAATATATGGATAATCTAATTGTGCATGCCTTTGGTGCTGAATTTCAAAGAAAGGGCACCTAAAGAACATAAGGAAAAGA
ACCATGTGTCCTCCTTTTTACTTGTCTCCATTTACTTTGGAAAAAAATATAATGTTTCTTGCGGTTAGATAAAATCTAATGAATATTAAAATTCTC
>LE_HBa0016F10_SP6_78978 (trimmed for quality and cloning vector)
GCCAGGTTTAGTGTTTAAAGTTTGAATTTTTGTTGATTTTAAGCTTGATTTTAAGGTGAAAAAAGGGTTCTTTTTAATGTAGGTATAAGCCGGAGATTGG
TGATATTATAGTCGGCCGCGTTATTGAGGTGAGTCTGATTCCCTGCAATGAGTTTCTTGTCAAGTTTGCTTCTTTCATGTTTAGGTGTTTCATTTGCTGC
TAGCTCTTACATCGGTTTCTTCCAAAAATATTGAAAATTGAGTAATCTTTGCTCCTTTTATGTTTAAGTGCTTATAATTAGAAGTTTAATGCTAGTGTAT
GGACAATTTGTTTCTAGTTGATTGAATCGGTATTTTTGGGTAGTACTGTAGTAGTTAGAAACCTCAATTGATACGAAAGTCGAAACCTGTTGCAATGGTA
AAGTTGCTCTCTTTAGTGACTGGTAGGTCATGAGTTCAAGGCTTGGAATCAACTTATTTTCAATCTACCATTTTCCCCTTACCATGCCTAACCCCGGGAG
CATCTTGTTCAAAGTTCACTTAGCAAAATGCAACTCTCTCCTAATGTATCCCCAGGTAATTGTAAGGGATAGGATAGAGAGTTAAATTATTTCCGCTGCT
CTTCAGGTTTTCCTAGTATGATCATAAATTCATAATAGCGTGGGATTTTTCACTCTACCATTTGTTAGAGAAATATATTAGCCTTCACATTAATATATGG
ATAATCTAATTGTGCATGCCTTTGGTGC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.955328
Expected error %
0.125912
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0016F10
Clone
Clone name
hba-16f10
LE_HBa0016F10
P016F10
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found