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Clone Read LE_HBa0160P17_SP6_77168

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0160P17_SP6_77168
Primer
SP6
ID from Seq. Facility
LE_HBa_160_P17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
770 trimmed for vector and quality, 931 raw
Sequence
>LE_HBa0160P17_SP6_77168 (raw untrimmed)
GGGGCGAGCTTTAGTTGAACCCAGCTCATTTTCGTGCTGTTTTTTCCTTTTCTATTGACTCTCTTAATTTGTAGAGGACCATATGATTTCTTTGGCATAT
ATCAGAAAATTTACCTGATAAAGCCACTCTGAAGTGTCTTTCTGGAGGCACTTGGAACGTGAAATTACAATGTGATGGAAGAGGGTTGCTTATACACAAT
GGTTGGAAGAAACTTCAGAAAAATAACCAACAACAAAATGGGGAATATCTCGTTTCAAGGTAAGACGGTGCTCTGCAATTCACAATAAGAATTTTCAGCA
AGAAAGGACTTGGAAAGACAGGTGAAGTCAACAAACATGGTAAAAACCAAAAAGCTCCAATATATGGAGGCAGCAAGCGTAAAAGGCCAAAAAAATACCC
TCACACTTCAAAATTCCCTAAACAGACTCGTGCTAACAGTGGAAATGGCGCAGGTATGATGATTTAACTCCTACCCTTCCAATTCTTCTTGCTGTTGTTG
AAAGTTAGCATAAAATGCAGTGATAGCGATCAAATTTAAACTTTCATCAACTGGAATTTCCTTTGCAGAAGACCTATTTTAACATGTGATGTACTAATGG
ACTACTATGTTGTATTCCCTTAGAAAAAGAGCTGCACTTGAGAAAGAAGACGACCATCTCACAGGTCTCACTCCAAATATTCCACAATTTGTGAAATGCT
TGAAAGGCTATAATGTGAAAAAGTCCTGGTGCTTCCTGGTAAGTGTTATCTTGAAGTAAAACTAGTTCATGCTTATTAGTCTCTGTCACCATTAATCTAT
GAAATGTGAATGTATGTAAAACCAATACTAAAAACTTCTAATGCAGTATGTTATTTCCGTGGTGTACCAGATACATTTGTCAAATAATCTATGTTCATGT
TGATAATTTCAAGACTGGAAAATGTTTTTTT
>LE_HBa0160P17_SP6_77168 (trimmed for quality and cloning vector)
CTCATTTTCGTGCTGTTTTTTCCTTTTCTATTGACTCTCTTAATTTGTAGAGGACCATATGATTTCTTTGGCATATATCAGAAAATTTACCTGATAAAGC
CACTCTGAAGTGTCTTTCTGGAGGCACTTGGAACGTGAAATTACAATGTGATGGAAGAGGGTTGCTTATACACAATGGTTGGAAGAAACTTCAGAAAAAT
AACCAACAACAAAATGGGGAATATCTCGTTTCAAGGTAAGACGGTGCTCTGCAATTCACAATAAGAATTTTCAGCAAGAAAGGACTTGGAAAGACAGGTG
AAGTCAACAAACATGGTAAAAACCAAAAAGCTCCAATATATGGAGGCAGCAAGCGTAAAAGGCCAAAAAAATACCCTCACACTTCAAAATTCCCTAAACA
GACTCGTGCTAACAGTGGAAATGGCGCAGGTATGATGATTTAACTCCTACCCTTCCAATTCTTCTTGCTGTTGTTGAAAGTTAGCATAAAATGCAGTGAT
AGCGATCAAATTTAAACTTTCATCAACTGGAATTTCCTTTGCAGAAGACCTATTTTAACATGTGATGTACTAATGGACTACTATGTTGTATTCCCTTAGA
AAAAGAGCTGCACTTGAGAAAGAAGACGACCATCTCACAGGTCTCACTCCAAATATTCCACAATTTGTGAAATGCTTGAAAGGCTATAATGTGAAAAAGT
CCTGGTGCTTCCTGGTAAGTGTTATCTTGAAGTAAAACTAGTTCATGCTTATTAGTCTCTGTCACCATTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.964126
Expected error %
0.180511
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0160P17
Clone
Clone name
hba-160p17
LE_HBa0160P17
P160P17
Clone type
BAC
Contamination
none
Estimated length
95,330
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found