Clone Read LE_HBa0034I02_T7_7683

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0034I02_T7_7683
Primer
T7
ID from Seq. Facility
LE_HBa_034_I02-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
707 trimmed for vector and quality, 818 raw
Genbank Accession
DU026990
Sequence
>LE_HBa0034I02_T7_7683 (raw untrimmed)
AATCGGGACCGCGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTCCAAGCAATGACAAGGGATGCTGGAACACGAGAAACACCAAGCACAAAAG
TTCTTACTCGTAATGATATCTACAAAATGATACAATAATATTTGGTGGATACTCTTCCTAATGCAATCTCTTCACCTCTGACAGCCACGTATCCTGGTAA
GACTAAACTTTCAGACTTAACGGTATGACATATTGACTCGCTGTATCTAATCATATGACAGGAAATCAAAAATTGTTTTCTAATTTATCTCGACCATGTT
CAAGACATGAAATTATTATAGAAAATGGTCAGGTTTTAACTGCATCAGCTGACTCCATTAAACCATTTCCAGAAGTTCTTTGTGTACCAAAGCTTAACGC
AAATCTGGTATCTATTGGGCAACTTGTAGAGAAAAACTTTTTGGTTATTTTTTCTCCTGATGGTTGTGTTATTCAGAACATATTGACAGGGGAAACGATG
GCCAAGGGACGTAAGGTTGGAAGGCTATTTCTTCTTCAATCTCAGGATACCAAACTCCATCAATGATTTCTTTTAAGCTTCAAAATAAATATATCCGACT
TTCAAATAAAATGTGGAACTTGTGGCATCTTCGTTTAGTCCATCCACACGCTTCTCGGCTAAATATTATGCTTAAATCATATAATTGGTTGGGCAAACAT
TCATTGATTTTTCCCTCTAAATTACCTTGTGAAAGATGTGCAAAATCAAAGAATCATAAACTTCCCTTTCAATTAAGGAATACTAATCCATTCTGCTCCT
TTTGATTTTAATCCTAAT
>LE_HBa0034I02_T7_7683 (trimmed for quality and cloning vector)
AGCTTTCCAAGCAATGACAAGGGATGCTGGAACACGAGAAACACCAAGCACAAAAGTTCTTACTCGTAATGATATCTACAAAATGATACAATAATATTTG
GTGGATACTCTTCCTAATGCAATCTCTTCACCTCTGACAGCCACGTATCCTGGTAAGACTAAACTTTCAGACTTAACGGTATGACATATTGACTCGCTGT
ATCTAATCATATGACAGGAAATCAAAAATTGTTTTCTAATTTATCTCGACCATGTTCAAGACATGAAATTATTATAGAAAATGGTCAGGTTTTAACTGCA
TCAGCTGACTCCATTAAACCATTTCCAGAAGTTCTTTGTGTACCAAAGCTTAACGCAAATCTGGTATCTATTGGGCAACTTGTAGAGAAAAACTTTTTGG
TTATTTTTTCTCCTGATGGTTGTGTTATTCAGAACATATTGACAGGGGAAACGATGGCCAAGGGACGTAAGGTTGGAAGGCTATTTCTTCTTCAATCTCA
GGATACCAAACTCCATCAATGATTTCTTTTAAGCTTCAAAATAAATATATCCGACTTTCAAATAAAATGTGGAACTTGTGGCATCTTCGTTTAGTCCATC
CACACGCTTCTCGGCTAAATATTATGCTTAAATCATATAATTGGTTGGGCAAACATTCATTGATTTTTCCCTCTAAATTACCTTGTGAAAGATGTGCAAA
ATCAAAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.956356
Expected error %
0.190367
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAU89779.1| Score 74 E Value 2e-13 Identity 43.20% Align. Length 505bp (71.43%) Frame 2
gag-pol polyprotein-like [Solanum tuberosum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0034I02
Clone
Clone name
hba-34i2
LE_HBa0034I02
C10HBa0034I02
P034I02
Clone type
BAC
Contamination
none
Estimated length
121,017
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found