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Clone Read LE_HBa0160F21_T7_76697

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0160F21_T7_76697
Primer
T7
ID from Seq. Facility
LE_HBa_160_F21-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
758 trimmed for vector and quality, 892 raw
Sequence
>LE_HBa0160F21_T7_76697 (raw untrimmed)
CTAACTCGGTCCCGGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGTAGTGGTGGATCTTTGGCCTTATATTGATCTGTTCAGGTTGTGAAAT
GTATTTTGTTGACTCGTAAATGACCGTTGATTTCATCTTAAATTCAAGGGTAAGTGGAAATATGGATGATAAAATTATAACTAAAAGGAATTCCCCCTAA
TTGTGCTTGAGTGAATGTAATAGAGAGTTTTAGTAACAAAATGCAGATGAATTGAGTAAATACCTTCGTGTATGGTTGGCATACACTGATGTTTGGATTA
TCATGTAAATGGCAAGGATAAATTCATAATGAGGAAAATGACCCAACTAAGGCACTATGATGATTTTATGACTCATTATAATAGAAATGCCACTATATGA
TACATATGATGGTCAACACTATTATTTTAAGGGAAAGATAAATTTATGAGCCTTCCATGCTATGGATGAATTCATTACTACTATAATGGGGCCTTAGCGT
AATGTGTATATTGATTCGTGATGTTGTCTGTGATTCATCAATCCCAAAGTTTCTTTTTAATCAGATCAAATAAGGAAAAATTATTTTTTTTTCGAACTCT
TTCATAACATAAATATTGTTAATAACTCTCCGGGATGAAAACAAAAAGTTTGTGACACTGAACTGAACTCCCGATATATAATAGAAAATCGGAAATACCC
CTTATCTCATACTACTCTCTCGATACAGAATCTAATGTTTTTGAAAAAAAAAAACAATACAAAAATTTCTCATATTGAATTCAAAGTGCCATGCTATTAT
AACTTAGTATTCAAATGGCGAAAGCATAGTCTTCCTTTTTTTCTCAATTAAAACCTCAATGGCGCCAAGCATGAGGGAAGCCTCACAATAGG
>LE_HBa0160F21_T7_76697 (trimmed for quality and cloning vector)
AGCTTGTAGTGGTGGATCTTTGGCCTTATATTGATCTGTTCAGGTTGTGAAATGTATTTTGTTGACTCGTAAATGACCGTTGATTTCATCTTAAATTCAA
GGGTAAGTGGAAATATGGATGATAAAATTATAACTAAAAGGAATTCCCCCTAATTGTGCTTGAGTGAATGTAATAGAGAGTTTTAGTAACAAAATGCAGA
TGAATTGAGTAAATACCTTCGTGTATGGTTGGCATACACTGATGTTTGGATTATCATGTAAATGGCAAGGATAAATTCATAATGAGGAAAATGACCCAAC
TAAGGCACTATGATGATTTTATGACTCATTATAATAGAAATGCCACTATATGATACATATGATGGTCAACACTATTATTTTAAGGGAAAGATAAATTTAT
GAGCCTTCCATGCTATGGATGAATTCATTACTACTATAATGGGGCCTTAGCGTAATGTGTATATTGATTCGTGATGTTGTCTGTGATTCATCAATCCCAA
AGTTTCTTTTTAATCAGATCAAATAAGGAAAAATTATTTTTTTTTCGAACTCTTTCATAACATAAATATTGTTAATAACTCTCCGGGATGAAAACAAAAA
GTTTGTGACACTGAACTGAACTCCCGATATATAATAGAAAATCGGAAATACCCCTTATCTCATACTACTCTCTCGATACAGAATCTAATGTTTTTGAAAA
AAAAAAACAATACAAAAATTTCTCATATTGAATTCAAAGTGCCATGCTATTATAACTT

This is probably not a useful sequence.

Problems:
  • Probable foreign DNA contamination
  • High predicted error rate
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.934838
Expected error %
5.22102
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0160F21
Clone
Clone name
hba-160f21
LE_HBa0160F21
P160F21
Clone type
BAC
Contamination
none
Estimated length
106,321
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found