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Clone Read LE_HBa0034F21_SP6_7576

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0034F21_SP6_7576
Primer
SP6
ID from Seq. Facility
LE_HBa_034_F21-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
650 trimmed for vector and quality, 810 raw
Genbank Accession
DU026900
Sequence
>LE_HBa0034F21_SP6_7576 (raw untrimmed)
GGGGAAATAAGGGGCATTTGGAACCTCACTNCAAACATACCTTTTCGAGAATAACTNTGATGGAAGAAGTTTCCAGCCCTGACCCTTGAGAAACCCATTC
AGGTTATGTGTAGTGCCGAAACAGCAAGCTAATTCCCTTGCAATCACAAGTTCATTAGAAATTCTATGGACAATGGTAGCAGTAGCACAAATCAAGTACA
AGAGGAAACACGAGATGTTGTTTACAGAGGCAATGAAAGTGATAAGAGGATGTGACGCTAACAGCTAGTAGAGAAAAAGAAGGGAGGAAAAAATAAAGGA
GATTAATGATGGTGATAAGGAGGGTGCGGTGAAGTACGTTCTTTGGTTGTGAAGGAAAATTGTGACAAATGGGACGAGACTGTTCTTGGTGATCTGGTTT
AAAAAAAAGATGAGGCCATCAAATATTTTTGAATGGTTATGGAAGAAAATCACAGTAACCCCAGCATGACAAAATGCTTTAGATGACAGCTTGCCTACCC
TCTGAGAAGTGATAAGTGTTAAACCAAAGAACTGTTATAAGTTGCAAAGTCTCTTAACCTCTATGGCAGCAATAAAGTCGCAGAAAAGTTTTAGATTAGT
CCATACTCCATATAGTTTCCACCCCACATACCCAGCCCTCATCTTCGATCTCACAGTAAAATAATAACAGGAAATGACCACAGCAAGTATTCAAGTCAGA
CAATTTGGCAGTTTTTATTGAGTAATTTAGTGGGAAAATGACACTGTGTTGATAAATAGTACAACAGCAATCCTAGAATATCCTCAAAAAAGAAAGACCC
CTTCTGAATG
>LE_HBa0034F21_SP6_7576 (trimmed for quality and cloning vector)
ATGGAAGAAGTTTCCAGCCCTGACCCTTGAGAAACCCATTCAGGTTATGTGTAGTGCCGAAACAGCAAGCTAATTCCCTTGCAATCACAAGTTCATTAGA
AATTCTATGGACAATGGTAGCAGTAGCACAAATCAAGTACAAGAGGAAACACGAGATGTTGTTTACAGAGGCAATGAAAGTGATAAGAGGATGTGACGCT
AACAGCTAGTAGAGAAAAAGAAGGGAGGAAAAAATAAAGGAGATTAATGATGGTGATAAGGAGGGTGCGGTGAAGTACGTTCTTTGGTTGTGAAGGAAAA
TTGTGACAAATGGGACGAGACTGTTCTTGGTGATCTGGTTTAAAAAAAAGATGAGGCCATCAAATATTTTTGAATGGTTATGGAAGAAAATCACAGTAAC
CCCAGCATGACAAAATGCTTTAGATGACAGCTTGCCTACCCTCTGAGAAGTGATAAGTGTTAAACCAAAGAACTGTTATAAGTTGCAAAGTCTCTTAACC
TCTATGGCAGCAATAAAGTCGCAGAAAAGTTTTAGATTAGTCCATACTCCATATAGTTTCCACCCCACATACCCAGCCCTCATCTTCGATCTCACAGTAA
AATAATAACAGGAAATGACCACAGCAAGTATTCAAGTCAGACAATTTGGC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.958139
Expected error %
0.375898
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0034F21
Clone
Clone name
hba-34f21
LE_HBa0034F21
P034F21
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found