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Clone Read LE_HBa0157C01_T7_75745

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0157C01_T7_75745
Primer
T7
ID from Seq. Facility
LE_HBa_157_C01-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1250 raw
Sequence
>LE_HBa0157C01_T7_75745 (raw untrimmed)
TCTTAGAACAACTACCTAGTATCATGTGCGGGAGACATCGCGGCTTAGTTCGTAGCAGAGCCGGTGCGATGACGAAGGCTGTGCCGGCGACTAAGACAAG
TACTAACCGCGGCCCACCTTTCTCCCCATTTCCCGTAATGTGATTNGATAGACCAAACATAAACANCACCTAGAGGGAGGCTGCCTCCTTGAGAAAGGCA
AGCTTCAGTATAGGATCGTGTAGTGGCGCTCTTCATCTGGACGCATCCCATATGGCACGTCTGATGAGGGCGATGCTACTATACGTGGCTCCCTCCTGCA
AGAAGCTGTGACATGTGGCAATGGATGTAGCGCTATGAGAGTGTACTGACTAACGTGCACTTACATGACTATATGTGAACTGTAAGGCAAATGGATGCCC
GAACGATTGAGAAGAGCATGAATTGAATGGTGATAGGTTTTTGATAGCCTCCTAGAATATAAGAGCATGTGAACATGTTGTAATCGTACCTATCAATATC
ATCGTGTGCTATATGAAATATGTCCGGATCAATGCAGGCTCGAACAATCGCTTACACTGAAACTTTCGTATATCTGGCAGAAACTATAACATTGATAAAT
AGTTAATAAATACATCGGGTTAAACAACACCCAATACAGTACGAGATAGTTTATTGAACGTAGTACGAGCACTACATCTCTAATAAACGTTGCTACATAA
TCCCTACACTCTCGCCGGAGTTGCCGCAGTGACCTAGATGAGAAATAACTTCTATCAAAATAACAGAGCGTATCATGAATCTCCACGAATCACAGCTTAC
CCCGATCTGAAACCGCTCGGTGCGCTTGTACAGCCACTCTCTCATTACACCAATTCACATTAGCTTGTGGTCTGCCTATGCGACACTCACCACAAGCTAT
TATGATCAACAGACTCGACAAATAGCAGCCTCAACTGACTGCATCCACCTACACATACCGGTCACTTGGACTCACATGTTCTACGAGAGTACTACAACTG
TCTGTCTGCACACATGACTTATGTCTTGTTCGTTGTCGGCGTCTATTATGAGAGCTTGAGCCTTGTAGAATGAGTGTATAAGTGAACAAGGATCGTAATG
CGCACAACAACTGGTAACGCAGTCTCAGGACCTGATCGTGGAGTGAATAAAATGGTATACTTTCAAAGATGAGACAACCATAAGTATACGGTTTATTTAG
ATTCTATNTCTCATGTATTATGTCTATTTCGATCTATCATTGTTTGTGCT
>LE_HBa0157C01_T7_75745 (trimmed for quality and cloning vector)
ATG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.1858
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0157C01
Clone
Clone name
hba-157c1
LE_HBa0157C01
P157C01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found