Clone Read LE_HBa0157A17_T7_75681

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0157A17_T7_75681
Primer
T7
ID from Seq. Facility
LE_HBa_157_A17-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 2068 raw
Sequence
>LE_HBa0157A17_T7_75681 (raw untrimmed)
GTGGAGATGAGCGTCGCAGTGNGTACACTGTAGAGGATCCNANTATGACGTCTATAGCTCACACGNAAGGACAGNCATATATATATAGAGACATGACAGT
CCTAGTCNCGGACACCGCTCCGCACTCGTGCAATGCACNACAGCANCTCAGTCTCGCGCCCTCTCTCGCCTCAGCGCCACNGCCACTCACCACACACACC
GTCTAGCACACAGCACTGAGCCTGACTAGACGCATATAGGCGTGAGCCGCTGCCGTCTCAAGTCAGCAGTCTGAGGACATGTAGCGTGATAGAGAGCTAT
GGAGAGGGTGTGANGACTANCTATTGCGGGCACATGTATGCGCCGTAAGCCACTTGCATATNNTGCATGTGGTGCGTACGGCGNGACGACGCACGTGCGA
CGCTCCGAGCTTCCACTAGCATGCAGCTACGCTATACGTATGTGANGATNGNGATGGANGCTGTGCTCGCATCTTGTACGCTGTGATATATGTGAGCTTG
ATAGTACGCTGCCGTCTTGTGGACNGNGGAATCGANANCGCAGCTGCTGACGACTGAACCCCGCGGCCTACGACGCGCGNAGCGTGCAACANTCGCTGTG
ATGTATGCGCTCGCTGCTGCTTGGCGTGATGTCGAACGCGATCTNGTCTGCGCTCTATATTNCGTATAGATGGCTTGTGATGCATAGTGTAGCTCTAACG
TGTACCCTATAGCCATACTGCAGCCAGTACATATNGACTGCTACACTCAGCACACGTGACTGNGNTATGCCTTGTTTTGCGNCTGCGCGTGTGTGTATGN
CATGCTATNTCTTGCGACTACTCGTATACCCTCGTGTGCGTACGATGTACTGTGATTGCTGCNCGCTGCTGTTNATCGCANGCTACAGCGATACNGNANT
CCNATCACATCGCACACACNCGTCAATCGNGCTCACATAGCATAGTATATAGAGCCAACGTAGCGCACGTAGCCGNTACACACACTGTACTGCCGCCAGC
AGCACNANGACACACGATCATCGTCCCATGTAGCGCTTGTNGACATCGCCNCATGCTATACACCTCGCACCGCCATCTACATACTCGNCTATATCTATGA
TCAACACACTTCTCACACAATCCGACACANCGACCACGTCGTGNGTACACACTGCNCGTCATATGCTGACCCTCTCACTCGACTAACTCGCGANGCACAC
TACAGTGGGATNGCTCTCNCGATCCTGACATNCTCATGACGTATACTGTTGATATANCTTCATTGATCTGTCACTACNGCNCTGACACNACTATANGTCA
CGCGCCGCTGCGTACAGACTGNANGCCGTGCGATCGATGCGTNCANACTTCGNTATGTAANCNCTNGCATNGTCCCACACACNTGATATACATCCGTAGA
CTCTNGNTNCATGTNGTAGCCGATATGCTAAGTTGTTGCGTACTCNCGTATACACCAACGCGCGNATTACTATTGCTGGNCTACGACTNGNCGCACTAGC
AGCGTNATACTGCTGTGTAAGGCTAGCTNCGACATACTGGATGTCACGCTTTCGGAANCTNANGNGCACNTGNANTGACTNTGCANTAACATGANTACAG
CATATGTGCTGCTACNATANCNCTCATCAGCAGCTANCATGACGCATAGNACCGCNGCNNGTCNGTAGATTGCTGACATGNGTCACGTCNACGTACNTAC
NAGCTTATACATCTGCTACACTGCTACTACCTGATCCGANTNCTACGCGCGCGATGCATNGNANTATGTACTCCTATATACGTACTCTAGCNATGCATTA
TGCTANACATGATGTNCTAGACGTNACGTGAACTATGATCGTACTCGTAGANGTCTACCTNGCATACTACACTGACGCTGCACCTGCANTTACTTATCTG
TATNTNTGTNACCTTATTCATNATCCTATNCTACTGANGACTATATCCTGGCACTTATAGTCGTGNCTATNATATGTGNCTTGTACGTCAGTACTGCAGC
TNTACTACTTACGCTGTACCGNTGCGTNGCATTCGATAGTATACNTAAAATACTGATGTTTANANGTA
>LE_HBa0157A17_T7_75681 (trimmed for quality and cloning vector)
AC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.880056
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0157A17
Clone
Clone name
hba-157a17
LE_HBa0157A17
P157A17
Clone type
BAC
Contamination
none
Estimated length
89,155
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found