Clone Read LE_HBa0034C04_T7_7399

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0034C04_T7_7399
Primer
T7
ID from Seq. Facility
LE_HBa_034_C04-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
754 trimmed for vector and quality, 861 raw
Genbank Accession
DU026747
Sequence
>LE_HBa0034C04_T7_7399 (raw untrimmed)
CCGGGACCCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCGAATGCCTCCATCTCGTTTTGCGGTTGAGATTGGTGCACCGCTACATTGAC
TTTGACAAAAAATTGGGTCACAAAAGCCTGGGCCGATTCCACACCAACCAGCGTTACCACAACATTGTCCAGTAGGACATGATTTACCATCAGCTTGCCA
TCCGCATCGTCCCTCTGGATATGGACCTGGACATTGCATCTGACAATATCCAGGAAAACAATACTCGTATGTGTTTCCACACATACCCGATATACCACAA
CACTCTCCGGTTCTATTACATTTCGTGCCACCATTTTGCATTCCACATTGGTATTGTGAAGGTGGAGGTGAAGGTGGGGGTGGAGACGGAGGTGGTGTGA
ATGGGCATTGGCTTTGACATAGTCCGCTAGCACAATAATCCGTTGTGGTCCCACACCAACCATCAACACTACAACATTGTCCACGAGGACATAATCTGCC
ATCAGCTTGCCATCCGCATCGTCCATTTGGGAAGGGAGGGGCCTGAACATTGACTCTGACAAATTTCAGGTTTACAAAAGTCTGATCCAGTTCCACACCA
ACCCAATAGACTACAACACTGTCCACTAGGACATTTTGTACCACCACCTTGCATCCCACAACTTCCATGTGGGGAGGGGCCAGTACATTGATTCTGACAA
AATCCAGAACCACAATATTCTGATGTTGTTCCACACCAACCCCATATACTACAACACATCCCACTAGGACATTTTGAGCGATGATTAGCTTGCATTCCAC
ATTCATCTCCATTCGCCGAACACGCCGCCCTGATGCATTCTTAATAATAACCTTCAAGTAA
>LE_HBa0034C04_T7_7399 (trimmed for quality and cloning vector)
AGCTTCGAATGCCTCCATCTCGTTTTGCGGTTGAGATTGGTGCACCGCTACATTGACTTTGACAAAAAATTGGGTCACAAAAGCCTGGGCCGATTCCACA
CCAACCAGCGTTACCACAACATTGTCCAGTAGGACATGATTTACCATCAGCTTGCCATCCGCATCGTCCCTCTGGATATGGACCTGGACATTGCATCTGA
CAATATCCAGGAAAACAATACTCGTATGTGTTTCCACACATACCCGATATACCACAACACTCTCCGGTTCTATTACATTTCGTGCCACCATTTTGCATTC
CACATTGGTATTGTGAAGGTGGAGGTGAAGGTGGGGGTGGAGACGGAGGTGGTGTGAATGGGCATTGGCTTTGACATAGTCCGCTAGCACAATAATCCGT
TGTGGTCCCACACCAACCATCAACACTACAACATTGTCCACGAGGACATAATCTGCCATCAGCTTGCCATCCGCATCGTCCATTTGGGAAGGGAGGGGCC
TGAACATTGACTCTGACAAATTTCAGGTTTACAAAAGTCTGATCCAGTTCCACACCAACCCAATAGACTACAACACTGTCCACTAGGACATTTTGTACCA
CCACCTTGCATCCCACAACTTCCATGTGGGGAGGGGCCAGTACATTGATTCTGACAAAATCCAGAACCACAATATTCTGATGTTGTTCCACACCAACCCC
ATATACTACAACACATCCCACTAGGACATTTTGAGCGATGATTAGCTTGCATTC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.977242
Expected error %
0.0539477
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
sp|Q9S8M0|LECT_SOLTU Score 151 E Value 2e-35 Identity 52.40% Align. Length 702bp (93.10%) Frame 3
Chitin-binding lectin 1 precursor (PL-I)
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
dbj|BAB40792.1| Score 108 E Value 6e-39 Identity 39.70% Align. Length 681bp (90.32%) Frame 3
mitogen PL-B [Phytolacca americana] sp|Q9AVB0|LECB_PHYAM Lectin-B precursor (PL-B)
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0034C04
Clone
Clone name
hba-34c4
LE_HBa0034C04
P034C04
Clone type
BAC
Contamination
none
Estimated length
112,464
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found