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Clone Read LE_HBa0152J03_T7_73781

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0152J03_T7_73781
Primer
T7
ID from Seq. Facility
LE_HBa_152_J03-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
34 trimmed for vector and quality, 933 raw
Sequence
>LE_HBa0152J03_T7_73781 (raw untrimmed)
ACCACCCGGGCCCGGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGATTATGCCTCTCGTGCCTCCCTTTATAGTTCGCTCTCTCACCATCAT
TACATGCCACATCACATCCACCTCCTAAATGGACCCACATCCCTCTATTAATAACCATTTGCCCCGAAGAATAGTGGTCTCTTAGTGACTAACCTGCTTA
ATGGTTATTAGGAAATCCTTCTTCAATACTTAGGTGCATGCTGTCCAATAGAATACATATCCTGACGTCTCCGACTCATACTACTCTATGTGTTACGATT
CGGGTTTCTTGCGCTTTGTTCACTCGTATACCGTATTTTTCGAACTATTCATTTAGTAATCACACATCTTTACCTAATATCGAAGTATACTATTTAGCTC
GAAATAATAGTGAAATCGTTGGAGTGTGTCCATCAGGACCTCACAACCGCTTGACGAGGACTCAACGCATCCCCAATGACTCTGTAGTACTCTACTAGAC
CAGTCCTCGCCTGATGAGATCATCAAACCCCACGATCACATACCTAATGGATCTCCACCCGCATTGCATCCCGACTAACGCCCATCACTTCCACCTCCCT
TGTGCTCGAAGCAAAGAATCCCTAGCCACTACTACACCAATATTTCAGCGATGACTACAAGAAGGCACATCAATGCGGAAGCTCCCTACTTAGACTTGTA
TCATTCTCCATAGCCTAGACGTCATTATATCCAGGACATCTCATCTCCTACATGCCTTCTATAGATATTCAGAACCTAGAAATAACATCACTCGCTTCAT
GTTCGCTCACTAAGGCCATCATGTTTTGATAAACAGATTTCTACCTTTCTTTAATGATTTGCTCCACTCTTCAACCTGATTTCTTTTACTCTACTATAAT
AAAGCGGATTTACTTCTTAGGCTCAATCTCATC
>LE_HBa0152J03_T7_73781 (trimmed for quality and cloning vector)
CTAGAGTCGACCTGCAGGCATGCAAGCTTGATTA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.782679
Expected error %
0.171192
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0152J03
Clone
Clone name
hba-152j3
LE_HBa0152J03
P152J03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found