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Clone Read LE_HBa0146K03_T7_72293

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0146K03_T7_72293
Primer
T7
ID from Seq. Facility
LE_HBa_146_K03-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
45 trimmed for vector and quality, 868 raw
Sequence
>LE_HBa0146K03_T7_72293 (raw untrimmed)
TTTTTTAATTGGTTCCGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTATTCTCCTTCGCTCCAATGCTTATTTTCTTCTTTGATTACTGTTGA
NGNCAAGAGAGGGACCCGCAAACGACAAAACGAGAGCGCCAGAGNCAGAGGAGGNAGAACCAACGCNCCGANGAGGGAAGACGAANCGCCCGAGAAAAAN
AAGGNCNCAACCACCAGCCCCGCCAAANNCNACAGNCCACCACGCCNCAGGAGCCAACCACCAACACCAACCACGGCCAGCCAGCACGGGCNANAAGCCC
CAGGAGGGGANACAGANACAAAAGANAGGCCCGAGGGCAAGCCACCAACAACACACCAAAAANCANANGGCCAGANCNNCGGGCAGCCGGGNNAGAGCNA
ANAAGCCCCAAGAGGGAAGACNNNNCGAACNACNNCGNGNCACCGCCCCGGGGCAAACACGGAACCCAACCAGAAAGAANCCGAACNGGAACCGGCCCAA
AAACAAAAGGAGAAGAAGAGGGCCAGGCNCANGCAACCCACCAAAAGCACAGGGGAGAAAACAGACACAGGAACCACAAAACCCAAAGAACAAAGCAAAG
ACCCCACAACAACACCAAGGGAAAGAAAAACCCCGGAACGGAACACAACAAGAAGACAAACCCCCAACCACAAACACCCCCGAGCCCCGAGGAAACGGGA
ACAAAGCCAAAAAAACCACCAAAGAAAAGCACGACCAAGGCCAAACCGGGCACCCGACCAGACGCCACACCGAAAAGAGAACCCGCGGCACCAACGGCAC
CCACCACCCAAACACAAAGACGGAAGCCAAACACACACCAACCCGCCGCCGCACCCCGCCGGAGACCC
>LE_HBa0146K03_T7_72293 (trimmed for quality and cloning vector)
AGCTTATTCTCCTTCGCTCCAATGCTTATTTTCTTCTTTGATTAC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.751515
Expected error %
0.238792
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0146K03
Clone
Clone name
hba-146k3
LE_HBa0146K03
P146K03
Clone type
BAC
Contamination
none
Estimated length
71,429
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found