Clone Read LE_HBa0146A12_SP6_71830

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0146A12_SP6_71830
Primer
SP6
ID from Seq. Facility
LE_HBa_146_A12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
637 trimmed for vector and quality, 846 raw
Genbank Accession
Sequence
>LE_HBa0146A12_SP6_71830 (raw untrimmed)
GGTTTCTTTATTTGTTTAATTTAAACATCTCGAGTAAATAGTTTTATTCGTACTTCTTACATGAAAAAAAGTTCTTATAAGAAATATACAAAAAATTAAA
ATAGATTTATAAATAATTATAACTTCGATTAACCTATAGATGTGATTGTTAAGACACTTTATTGAAACAGATTCTAAACTATAGTTGATATAATTATTTT
CTCACATGTGTTGCCCTCTTTATACACATTTCCTATCAAAACTTCATTGTGAATTAGCTAGTGTACAATAGTTAGTAACTATCCTACCATATTTATTATT
TAGGTTTTGGATCGTTGGTATAAGTAACTTCACAAATATTGTCTTTTATGTTTTTCATAGATCTCATACGTATGGGAACAAAATTATAGAGAACTTATAA
TATACATAATTTTTTACCATTACATATGCAAACAATATATATTCTCTCACGATTTTCAAGACAAAGAGAATTTGATGATATTTAAGTATTCATTGTGGCA
AATGGCAATGTATCATTAGATTAAATCACCAAAAAGAAAAATTAAGAAATTTAAAAGGTTCAATCGTCAAACATCTTATAAGACGAGTAAAGAAAATTTG
TTTGTAGCATTAAGTTTTTAAAATTTGAAGCTCAGAGGAATATCTATGAAGACTAGAATTCAAGAAAAGCAATGAAAGTCTTACCTCCCTAAATAGAAGC
ACTCAAGCTCATATTTTGGGTTTAAAAAAAAAAAGTCCCACCTTCCCCAAAGCCGATTAAAATCCCCTTCCAAGACATTAAACATCCCTATTTTTGGATA
AAGAATTTGTCAAAGTACAAAATTTTTATCCACGTATCATTACCAC
>LE_HBa0146A12_SP6_71830 (trimmed for quality and cloning vector)
TCTCGAGTAAATAGTTTTATTCGTACTTCTTACATGAAAAAAAGTTCTTATAAGAAATATACAAAAAATTAAAATAGATTTATAAATAATTATAACTTCG
ATTAACCTATAGATGTGATTGTTAAGACACTTTATTGAAACAGATTCTAAACTATAGTTGATATAATTATTTTCTCACATGTGTTGCCCTCTTTATACAC
ATTTCCTATCAAAACTTCATTGTGAATTAGCTAGTGTACAATAGTTAGTAACTATCCTACCATATTTATTATTTAGGTTTTGGATCGTTGGTATAAGTAA
CTTCACAAATATTGTCTTTTATGTTTTTCATAGATCTCATACGTATGGGAACAAAATTATAGAGAACTTATAATATACATAATTTTTTACCATTACATAT
GCAAACAATATATATTCTCTCACGATTTTCAAGACAAAGAGAATTTGATGATATTTAAGTATTCATTGTGGCAAATGGCAATGTATCATTAGATTAAATC
ACCAAAAAGAAAAATTAAGAAATTTAAAAGGTTCAATCGTCAAACATCTTATAAGACGAGTAAAGAAAATTTGTTTGTAGCATTAAGTTTTTAAAATTTG
AAGCTCAGAGGAATATCTATGAAGACTAGAATTCAAG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.896466
Expected error %
0.124911
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0146A12
Clone
Clone name
hba-146a12
LE_HBa0146A12
C06HBa0146A12
P146A12
Clone type
BAC
Contamination
none
Estimated length
72,514
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found