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Clone Read LE_HBa0145P19_SP6_71796

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0145P19_SP6_71796
Primer
SP6
ID from Seq. Facility
LE_HBa_145_P19-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1134 raw
Sequence
>LE_HBa0145P19_SP6_71796 (raw untrimmed)
TTATTTCTCCTTATTACTAGAGGAATAAAGGGTACCCCTACTTAGGTTTATGTTTTCTAAAATACATTNTAAAGTATGGTGGTACCGCCTCATGGAGGAG
AAAAAGCCACCCCCCTACATCGCCTTCAATGAGTTAGTGACAAAGAAGTAATATATATGACGTCCCCCTCTAACTTTACCCTTGTGCGCATCTATCTTAC
ACTTATTTTTCTCTGCGAATTTGCTCTTTGCGATGATTGATAGGTCACCCTACATAATCCTTCGATAGACACCTCTACGGATATATCACTTGATTANATC
TCTGTCCTCGCCTAGTCGTGCCTCCACACCAAAACTGAAACCCCCCCCCCCCCTCATGCTTCCCTTCGCTAATTCCTCACTCTTTACCTAACTCCTCTTC
TCAAGATTGACACACATCTTCGATCCTCCCTCCTACTTCGCCCCCGGTTTATTTCTCCTGTGACTTGTCTCTCCTTTTTTAAATACATTATATTTTCATC
ACCTTTAAAGAAATACTAACATATTTGATTATATTATTCTGATATTATCTTCTCTTTCCCATTATAAACCTCTCTTTACTTAATATCCTTGCCCGCCTAC
CACTATCTATATCACACCGCTACGCCCTCTCTCCGACACAGAGAATACATCTTGAACTGGTGTACTAAACATAGCTTGGTCTGCTTTATTTTGGTTTGCT
CTCAGTTCACCTATGTCTACATTTTATTTTTACAATCATCATGTACTGCTCCATCTTACTATATCTCTTGTTTATATTCTTTATTGTACACCTCTATACT
CATATCTCGCTCATTCTAATACACAATCTTCTGCTCCACCCCCTCTCCCCCCTCTGCCCCTCCTGTTCTCCAGCTCCACTACTGACCTACTTTCAACGTC
TTTCCTATTATACACATTAGCCAATCATTTACTAACACTTTCACCTCCTACTACTCGGCCTCGACATTTATCTTCTTATACTATATTCTGAATTATAATG
CCGTCTATACACTAACATTTACTACTCAGTCACATACTCTGCTCCGTTTATTTGCTTATCTTTCTTCCTTCCCGCACATTTTAACTATATATTCCTATTC
CTTCCTCTCCAATACCTCTTACCTCTACGAATAC
>LE_HBa0145P19_SP6_71796 (trimmed for quality and cloning vector)
TT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.729226
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0145P19
Clone
Clone name
hba-145p19
LE_HBa0145P19
C05HBa0145P19
P145P19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found