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Clone Read LE_HBa0145N21_SP6_71704

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0145N21_SP6_71704
Primer
SP6
ID from Seq. Facility
LE_HBa_145_N21-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
339 trimmed for vector and quality, 921 raw
Genbank Accession
DU063899
Sequence
>LE_HBa0145N21_SP6_71704 (raw untrimmed)
ATTTCGGGCAGGACAATCTCCTTTCAGATGGCCGTTTCGACCACAGTGAAGGCACAGTAAATTGTCTGAGACAAACACATATTTGTTGTGGGGGGTGTAA
GGAGGAGTAATGTTCAAACTTCCTAACCCCCTTTTATTTTTGTTGCTTTGACATGTAACATTAGATAGCAGTTTGGTGGAGCTGGTCCATTTTAAGGATA
CTTGAAGTTTCTCCTTAAGACGGACCAGGTCCCTCTCTATCTGATAATTTCTTTTCAGGGTTAAGGAAAGTCTGGTGTAGCCTCCCCCTTCCTTTTACCA
GATTTACAATCATCAAATCTAGTTGCTCCTTAAGTTCCAGTTTTTTAGATTCAAGAACCTTCCCTTGTTACTCAAAAATATACATCTGAACTACCATTAT
TTCCTTTTCTTCATTTATACCATCAAAACTACTTTTCTTAGAGTCCCTTTCAGTATTTAACTCTATTAAAGAGTCAATTCATTGACATTTTGCTTACGTT
CTCATCCTTTTTATAGATTAAGTATTCAAGAGTTTGCTTAAATGTTATAAAGAGTTACCTTGTATTCTTTCACTCTGTCTTCGTTTGTACTTATCCATCA
TATGCTATGGTTGGGCATGTTGGGACCATGTATGGTTTCTTCCTCCTGTTTTTCTTTTCTGACCTTATATTTTTTTTTTTAATTATATTTTTATATCTTT
ATATAACTTTAATCGGTATTTTTACGGTGTTCGGATTATATTCACTCCCTACATTCCTATTTGTATTTCTTTTTGTCTTGTTCCATTTTCCCCTTAATCT
TGTTCTCTTCCTTTAATTACTTACAATTTGCTCTAATATACCAATCTATATATTACTGGACACTTTTCAAGAATTTATCCGACTTACTTTTTGTCTGCAT
TCTTATCTTAACTCCTAATTT
>LE_HBa0145N21_SP6_71704 (trimmed for quality and cloning vector)
CGTTTCGACCACAGTGAAGGCACAGTAAATTGTCTGAGACAAACACATATTTGTTGTGGGGGGTGTAAGGAGGAGTAATGTTCAAACTTCCTAACCCCCT
TTTATTTTTGTTGCTTTGACATGTAACATTAGATAGCAGTTTGGTGGAGCTGGTCCATTTTAAGGATACTTGAAGTTTCTCCTTAAGACGGACCAGGTCC
CTCTCTATCTGATAATTTCTTTTCAGGGTTAAGGAAAGTCTGGTGTAGCCTCCCCCTTCCTTTTACCAGATTTACAATCATCAAATCTAGTTGCTCCTTA
AGTTCCAGTTTTTTAGATTCAAGAACCTTCCCTTGTTAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.954265
Expected error %
0.524831
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0145N21
Clone
Clone name
hba-145n21
LE_HBa0145N21
P145N21
Clone type
BAC
Contamination
none
Estimated length
101,011
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found