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Clone Read LE_HBa0145G05_SP6_71336

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0145G05_SP6_71336
Primer
SP6
ID from Seq. Facility
LE_HBa_145_G05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
74 trimmed for vector and quality, 844 raw
Sequence
>LE_HBa0145G05_SP6_71336 (raw untrimmed)
GTTTTTTTGGGCGGGTTGTATCTCCCATGAGTGTGCTCCAGCTTTTAGGTTGTAAAAAATGAAAGATGTGGAGTTTTGTGAATGTGTATTGACTACACGA
CTACTAAACGAGGTGACGCAGTATAAGAACTAGTATCCTCTTCCCCGCTTTGATGACTTGTTCTATCACTTTCTAGGTGCTTGTGTCTTCTCTGAGATTG
ACTTGAGATCCGGTTATCGTCTCTTGAGATTACGGGCAAGGGTTGTGCCTTACACTGCTTTTCGTACAAGGTATGGGCATTACAAATTTGCTGCGATGTC
TTTTGGTCTAACGATATGCCCCTGCTGCGTTCATGAGCTTGATGAACAGGATGTTTCAACCATATATGGACCTCTTCGTTATCGTATTTATTGATGATAT
ATTGGTATACTCAAAGAGCAAGAAAGAACATGAAGAGCATTTGAGAATGGTATTGGA
AATGTTGAGGGAGAAAAAGCTTTATGCCAAGTTCTCTAAATGT
GAGTTTTGTCTATATGCAGTGTCCTTCTTGGGGCACTTGGTTTCTAACGATGGAGTGATGGTGGATCCTTCTAAGATTGGGACTGTGAAGACTTTGGTAA
GACCTACTAATGTGTCTGAAATAACGAGCTTTGTTGGCTTAGCTCGCTACTGCCGTCCATTTGTCATGGGATTCTCTTTCTTGTGCTTCCCACTTGACGA
ACTTGACAACTAAAATGGTTCCCTTTTTAATGGGCTCATTAATGTTATGTAAATTTTTTCGTAATTTTGATACTTTTTCTGATTTCCCCACCTTTTTTTT
ATCATGCTCTTAATAGTGTATTTACTTCCTTTTTCTTCTTATTT
>LE_HBa0145G05_SP6_71336 (trimmed for quality and cloning vector)
AATGTTGAGGGAGAAAAAGCTTTATGCCAAGTTCTCTAAATGTGAGTTTTGTCTATATGCAGTGTCCTTCTTGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.886257
Expected error %
2.02159
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0145G05
Clone
Clone name
hba-145g5
LE_HBa0145G05
P145G05
Clone type
BAC
Contamination
none
Estimated length
87,341
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found