Clone Read LE_HBa0138H16_SP6_70638

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0138H16_SP6_70638
Primer
SP6
ID from Seq. Facility
LE_HBa_138_H16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
668 trimmed for vector and quality, 851 raw
Sequence
>LE_HBa0138H16_SP6_70638 (raw untrimmed)
GCTTTTTAAACCTTTAGATTTCTAGGAAACTGTTCCAAGACGGGGTAAGGGAATACTGGAAAATGTTTAAACAAGAATAATATGCTTACTTTTGATTAGC
TCCTGTTCGCGCAACCACTGTTTCCGGAGCCTTTCACGTTCTGCTTGTTCCTCTGCCTCCCTCTCACTGAAAAGGTGCACTTTGAATTCCAAATTACATA
GTAAAAAGGCCAGAAGAGAACACGATAAGTAAAACAGAAGTAGAAAGGATTTATTTTGGGGGAAGCAGATTGTAGGAATGCCCAACCTGTCCGGCAAGAA
GCTTGTCTCTACTGTAGGATCTTTCCCAAACTTTCTCCACACGCGCTTGTCAGATTCTTCATTCTCTATATAGGAGATGAAAGTGAATGGAAATATAAGT
ACCATGCCATCACAATCTGAACCCAATTTATATCTTCAACTATGTCGGAAATAATAGCTAACATAATTGTTTAAACATGCTCATGTTGTGGATGGCCCTG
CATGTACATATGCATATCTGGTGACACTTGATACTTGATAGCGTCATAGTGGCCCGCAACATAGCAAAACATTACTTACGAGACTAAATCTTGATGAGGA
AGAACAGAAAAATTACAGTGAGGAAGAGATGATAGATGAAACAGGATTTTCATTAAAAGAAGTTATGAACTGTAGGATATCTACTTACAAAAACTCCTGA
AACTCAAGTGCATTTTACCTCCAAAGCTGAAATCATGTCAAACTGCATATTTATGTGATTCAACAAACCAACAAAAAGTTCTCCCACAGTTTAATATTTA
GACAAATTGTGGCTATGTTCTTTGTTCAAAATTTCTAAAATAATATATTTT
>LE_HBa0138H16_SP6_70638 (trimmed for quality and cloning vector)
ATTTCTAGGAAACTGTTCCAAGACGGGGTAAGGGAATACTGGAAAATGTTTAAACAAGAATAATATGCTTACTTTTGATTAGCTCCTGTTCGCGCAACCA
CTGTTTCCGGAGCCTTTCACGTTCTGCTTGTTCCTCTGCCTCCCTCTCACTGAAAAGGTGCACTTTGAATTCCAAATTACATAGTAAAAAGGCCAGAAGA
GAACACGATAAGTAAAACAGAAGTAGAAAGGATTTATTTTGGGGGAAGCAGATTGTAGGAATGCCCAACCTGTCCGGCAAGAAGCTTGTCTCTACTGTAG
GATCTTTCCCAAACTTTCTCCACACGCGCTTGTCAGATTCTTCATTCTCTATATAGGAGATGAAAGTGAATGGAAATATAAGTACCATGCCATCACAATC
TGAACCCAATTTATATCTTCAACTATGTCGGAAATAATAGCTAACATAATTGTTTAAACATGCTCATGTTGTGGATGGCCCTGCATGTACATATGCATAT
CTGGTGACACTTGATACTTGATAGCGTCATAGTGGCCCGCAACATAGCAAAACATTACTTACGAGACTAAATCTTGATGAGGAAGAACAGAAAAATTACA
GTGAGGAAGAGATGATAGATGAAACAGGATTTTCATTAAAAGAAGTTATGAACTGTAGGATATCTACT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.971507
Expected error %
0.402791
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0138H16
Clone
Clone name
hba-138h16
LE_HBa0138H16
C01HBa0138H16
P138H16
Clone type
BAC
Contamination
none
Estimated length
80,413
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found