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Clone Read LE_HBa0033I22_SP6_6954

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0033I22_SP6_6954
Primer
SP6
ID from Seq. Facility
LE_HBa_033_I22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
768 trimmed for vector and quality, 946 raw
Genbank Accession
Sequence
>LE_HBa0033I22_SP6_6954 (raw untrimmed)
ATAGCTAACATNTATNGAATCATGGGCTAGGTTATATNGGTGTTATCCCGATGTCAGATTCTGAGAAGATCTTTTCATTTGTTATTAATTTATGTCTTGT
GGTGAAGCTAGATGTGTGCCGCTGGGCTTATGGGGGTTCAACCAAGTTGTTGATTGTATGATTATTGCTATTATGTCTTTGTTTATGACTTATAGGCTTA
TTAGGGTCCAATATGGTTTAGATAACTTATTGGTTTTGTCATTTACCTTTTAATTTTGACTATAATTCATGTCATTGTTCATTAGCCTTCAAAGGTATTT
CTTACTCTTTTATTACCAATGTCCTAGACAAACTTTCTCCATAGTAGGTAGTTGATTTTGGGGAAACTGATCATATGAATAGTCTCTTTCATCTCTTCAT
ATCGTATTTCCCTTCTCCTAGCTATAAAAATAACTACAGTTAATGGTTCAGTTATCACTTTAACTGGTCAAGGAGACATACCACTTAGAATATACTTGAT
ACTTGAAGATTTCCTTCATATCCTGAAGTTATCTACAAATCTCATTTCTATCCAGTAACTCACCAAAGATTCTAAGTGTCAAGTAACTTTCTGCCCTTCA
TATTTCTTATTTTAGGAATAGAACACGAAGGAGATGATTGGGTGTGCTAGTGAGAAAGGTCGCCTTTGTTATTTGAATTTCCACAATGGTGAATATATAT
TTAAGAATTCTTTGTCTAGTTCATTATTATATGAGTATATTATGTCTAATAAATAGAAAGTATGTCTTTATCATCGTTGGTAAGGTCACCTTTCTATTTA
TGTAATTAAAAGGATGTTTCCATATTTGTTTCAAGATTTGATTGTGGAGTCTTTTCATCGTGATGATTGTGAATTACAAAACACAATGTATTTCCTTTCC
ATTAGTCACAAAGATGTCAAACTCCTTCTCTCTTACTCTAGCGATT
>LE_HBa0033I22_SP6_6954 (trimmed for quality and cloning vector)
TGTTATCCCGATGTCAGATTCTGAGAAGATCTTTTCATTTGTTATTAATTTATGTCTTGTGGTGAAGCTAGATGTGTGCCGCTGGGCTTATGGGGGTTCA
ACCAAGTTGTTGATTGTATGATTATTGCTATTATGTCTTTGTTTATGACTTATAGGCTTATTAGGGTCCAATATGGTTTAGATAACTTATTGGTTTTGTC
ATTTACCTTTTAATTTTGACTATAATTCATGTCATTGTTCATTAGCCTTCAAAGGTATTTCTTACTCTTTTATTACCAATGTCCTAGACAAACTTTCTCC
ATAGTAGGTAGTTGATTTTGGGGAAACTGATCATATGAATAGTCTCTTTCATCTCTTCATATCGTATTTCCCTTCTCCTAGCTATAAAAATAACTACAGT
TAATGGTTCAGTTATCACTTTAACTGGTCAAGGAGACATACCACTTAGAATATACTTGATACTTGAAGATTTCCTTCATATCCTGAAGTTATCTACAAAT
CTCATTTCTATCCAGTAACTCACCAAAGATTCTAAGTGTCAAGTAACTTTCTGCCCTTCATATTTCTTATTTTAGGAATAGAACACGAAGGAGATGATTG
GGTGTGCTAGTGAGAAAGGTCGCCTTTGTTATTTGAATTTCCACAATGGTGAATATATATTTAAGAATTCTTTGTCTAGTTCATTATTATATGAGTATAT
TATGTCTAATAAATAGAAAGTATGTCTTTATCATCGTTGGTAAGGTCACCTTTCTATTTATGTAATTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.935435
Expected error %
0.0586308
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0033I22
Clone
Clone name
hba-33i22
LE_HBa0033I22
P033I22
Clone type
BAC
Contamination
none
Estimated length
105,678
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found