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Clone Read LE_HBa0128M19_T7_69349

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0128M19_T7_69349
Primer
T7
ID from Seq. Facility
LE_HBa_128_M19-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
667 trimmed for vector and quality, 874 raw
Genbank Accession
DU074340
Sequence
>LE_HBa0128M19_T7_69349 (raw untrimmed)
TATCCCGGGTCCCGGGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTATTCAAGAATGATTATTAGCAGCCCAGAGTCGACAGAAGTCATATGCA
TATAATCAGCGTCACGATTTGGAGTTTCAGATTGGCGACTGGGTATTCCTGAATGTATCACCCTTGAAGGGTGTGATGAGATTTGGCACGAAGTGGAAGC
TCAGTCCGAGATACATTGGGCCTTATCAGATTGTTCGTAGGATTGGCAAGGTTGCCAATGAGTTGGATCTACCATCTGATTTGGAGGAAGTACATCCAGT
CTTCCATGTATTGATGCTATCGTAAATGTATTGGTGATTCTTCTAGAGTATTCCCTGTAGATGATGTTCAGGTAACAGGGGAGCTTTCATATGAGGAGAA
ACCCGTAGCTATACTTGATCGCCAGGTTAGAAGGTTACGTAATAAGGATGTGGCTTCCGTCAAAGTGTTGTGGCAAAAAAATAATAGGGAGGAGATGAAT
TGGGAAGTGGAAGACGAAATGAATAATAAATATCCTTACTTGTTCCCCATACCTTCAGGTAATTCAATTCCTAGCTTGACTATATTGATTGATAAACGAG
GTTATGTAGTAAGTTGTGACTCTGTGAGGCATCTGTAAGTTACGGAATGCAAGTTGATAGGTATAACTGTTAGAGAGACCTCGCTGGGAACTTTTTTTTG
TAAGATGCTAACTTAACATTTCAGGACGAATGCTCCTAAAGGGGGAAGGATGTTGTGCCCCCGTTTTTTATACTTAGTGGCGCGTTTTTATTAATAGAAT
GTATGTTCCTAGTCAGGGGATTTACTTTTAAGTCCAAGTGATTGTACAATATTATGGCATCTTTTTTTTTTGAG
>LE_HBa0128M19_T7_69349 (trimmed for quality and cloning vector)
AGCTTATTCAAGAATGATTATTAGCAGCCCAGAGTCGACAGAAGTCATATGCATATAATCAGCGTCACGATTTGGAGTTTCAGATTGGCGACTGGGTATT
CCTGAATGTATCACCCTTGAAGGGTGTGATGAGATTTGGCACGAAGTGGAAGCTCAGTCCGAGATACATTGGGCCTTATCAGATTGTTCGTAGGATTGGC
AAGGTTGCCAATGAGTTGGATCTACCATCTGATTTGGAGGAAGTACATCCAGTCTTCCATGTATTGATGCTATCGTAAATGTATTGGTGATTCTTCTAGA
GTATTCCCTGTAGATGATGTTCAGGTAACAGGGGAGCTTTCATATGAGGAGAAACCCGTAGCTATACTTGATCGCCAGGTTAGAAGGTTACGTAATAAGG
ATGTGGCTTCCGTCAAAGTGTTGTGGCAAAAAAATAATAGGGAGGAGATGAATTGGGAAGTGGAAGACGAAATGAATAATAAATATCCTTACTTGTTCCC
CATACCTTCAGGTAATTCAATTCCTAGCTTGACTATATTGATTGATAAACGAGGTTATGTAGTAAGTTGTGACTCTGTGAGGCATCTGTAAGTTACGGAA
TGCAAGTTGATAGGTATAACTGTTAGAGAGACCTCGCTGGGAACTTTTTTTTGTAAGATGCTAACTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.970421
Expected error %
0.524273
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38724.1| Score 124 E Value 1e-50 Identity 66.70% Align. Length 495bp (74.21%) Frame 1
putative retrotransposon protein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38734.1| Score 124 E Value 8e-42 Identity 69.40% Align. Length 456bp (68.37%) Frame 1
putative polyprotein [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0128M19
Clone
Clone name
hba-128m19
LE_HBa0128M19
P128M19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found