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Clone Read LE_HBa0128E06_T7_68939

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0128E06_T7_68939
Primer
T7
ID from Seq. Facility
LE_HBa_128_E06-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
803 trimmed for vector and quality, 905 raw
Genbank Accession
DU073996
Sequence
>LE_HBa0128E06_T7_68939 (raw untrimmed)
TAAACTGGGTCCCGGGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTTGCTCATACTGAGTACTAATCTTACTTAACCCTAAACTCATTCCTTG
ATTAATACCATAAATAATAACCACACCAGACACAAAACTCCAATGGAGTTTAATACCTAGCATTCTGAACCAGTAATATGGCTTCAAAATTAGTTCAAAA
ATTCTATCTTTTTAAATTGCTCCTCTAATGGAAAATCATCTTCTTGATTCATGGCCATTATTCAACTAGTAGTTTGCATAGTCAACTGGAAATGTAAAAT
CAAAGTAATAAAAGAAGAAGACAAATATTAAATTTTTTTATTTTTTCATTCATTGTTTGATGTTCATATAAAAGTTTGCATCAGAAAGTTCCATAATAAA
GGTGATTCTATATTCAAGAAAACTCAAATTCTAAACCTTTTGATTCTTTTGATTAAGAATAAAAAAAATATTTATCACAATCCTTGTTGATTTTACTCCT
TAATTATCAATAAAATCACGCTTCAAAGTTAATCAGGTCAATTGTTCCTATAGTCGAACTATTATTATAATCGATGATATTCGTAATTTGAATGAAAGAC
CTCTAATTAAAAGTGCGATTACAAATATTTTGAAAGAAAAATATCAATTTTGTGGTTCTGGAAAAATTATGGTCCAGTCAGTCCAAATAGCAACATTATT
GTGTTAACCATAAATTGATCCAATCAATTGACAGGCTGAACTAGCTGCTGTTGGGACTGAATCCATGGGCCACTCTTTTTATAGACCACTTTGACAATTG
TTGTTTTCATAAATGAAAAAATTGTATATAATAGCCAAATAATAACCTAAAATAAATGGAATAGCTAGGGGTTGATCTAATGGTGCCCCATAGCAAACGT
TAGCT
>LE_HBa0128E06_T7_68939 (trimmed for quality and cloning vector)
AGCTTTTGCTCATACTGAGTACTAATCTTACTTAACCCTAAACTCATTCCTTGATTAATACCATAAATAATAACCACACCAGACACAAAACTCCAATGGA
GTTTAATACCTAGCATTCTGAACCAGTAATATGGCTTCAAAATTAGTTCAAAAATTCTATCTTTTTAAATTGCTCCTCTAATGGAAAATCATCTTCTTGA
TTCATGGCCATTATTCAACTAGTAGTTTGCATAGTCAACTGGAAATGTAAAATCAAAGTAATAAAAGAAGAAGACAAATATTAAATTTTTTTATTTTTTC
ATTCATTGTTTGATGTTCATATAAAAGTTTGCATCAGAAAGTTCCATAATAAAGGTGATTCTATATTCAAGAAAACTCAAATTCTAAACCTTTTGATTCT
TTTGATTAAGAATAAAAAAAATATTTATCACAATCCTTGTTGATTTTACTCCTTAATTATCAATAAAATCACGCTTCAAAGTTAATCAGGTCAATTGTTC
CTATAGTCGAACTATTATTATAATCGATGATATTCGTAATTTGAATGAAAGACCTCTAATTAAAAGTGCGATTACAAATATTTTGAAAGAAAAATATCAA
TTTTGTGGTTCTGGAAAAATTATGGTCCAGTCAGTCCAAATAGCAACATTATTGTGTTAACCATAAATTGATCCAATCAATTGACAGGCTGAACTAGCTG
CTGTTGGGACTGAATCCATGGGCCACTCTTTTTATAGACCACTTTGACAATTGTTGTTTTCATAAATGAAAAAATTGTATATAATAGCCAAATAATAACC
TAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.918235
Expected error %
0.490545
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At1g79710.1 Score 65 E Value 3e-11 Identity 19.00% Align. Length 152bp (18.93%) Frame 1
68414.m09296 integral membrane transporter family protein similar to high affinity folic acid/methotrexate transporter 5 (GI:21898554) [Leishmania tarentolae]; Interpro IPR001991/ PR00173 Sodium:dicarboxylater symporter family
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0128E06
Clone
Clone name
hba-128e6
LE_HBa0128E06
C03HBa0128E06
P128E06
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found