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Clone Read LE_HBa0186M17_T7_66273

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0186M17_T7_66273
Primer
T7
ID from Seq. Facility
LE_HBa_186_M17-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1719 raw
Sequence
>LE_HBa0186M17_T7_66273 (raw untrimmed)
GTACACTCTTACAGTGCACTCAGCTTATTACACGCTNGATGGAGGACATCCACTTCTCTATCGCTAGGGTCAGTACTCATNTGGNCAGGAGGACTATTGA
CCTGATGACANTCTTCNCTTNAGGAAGATACACNTAGCTATGAAGATGACGTGNTCTCGCGTCTATAGATCACACTCCCTNTATTTTGTGTACAGTAGTC
TACGGCGTCTGCACGGCACATCTTGTGGAGAGTTACGTGCCCTATATAGCCTCTAGAAGCACGATAGNACAGACTNATATACATATACAGATTGCGTGNG
GATGTAGGNANGNTGCNCTGCNCACGTTCNGCTCTNACGTNANGCACTCGTGCTACATATCACAACNGCACGGTGCACCAAGCTCACCNCNGGTCGNCNA
NGATGCGAGTCATCATATGTTCTCACAGTACTACTAGTAAGTACTCGAATCCTCAGTAGCTAGTATATCTGGATAGTCACTGATGTACACANAGTCATAC
AGAGCTNGAAGAANCGATGTCGAGACACCTACTGTTCATATTACTAGTCTACCTCTATCAGCTACTCTACTTGCCTACACNTACGAACTCTTAGCCATCA
CTCTCTCTGAATCTTTTCGCGCTACTACAACTATCTCTCTACATATAGAAATTAGCTCTTTATTCACGAGACGACTNATCATAGATCACTACGACGCGTG
TGTTTGTCCCTGTATAGTGTTATTATCGCGTATCTAAGTAATGCTCTAGATCTTTCGCNTAGGTNCGTGTNGCAGTGACTGTATGCGATCATANTAATAG
CATGCATAGCATCTGACAATCNCANCACCTCGACGTTCGTCTCTTAATCGTNCTTCATTGTCTCTTATATTACTCAGAGTATGACATAACGAGAGGATTT
GCTCGATGCTACGCTGTATCGACGTCACATATGCTGTCCTGTATGCTTATAGGCGATCTGGTATACATGTGTGTCGTNCTTTGCTAACTCTTTNTAGATN
GCTAGTGTGTCCTNAGGATATATTNANTTATGTGCACAATACGNTCGAGTTTCTAAATAGTATGTAGGATCTGACCGTCGCCAGTAGGTAGAAGTGCAGC
AGTTGTCAGTTGCNCTGTACTAGCGACAAGTACATGCTGTTGTTNACGCGCTCTCANGTNGNGGTGATACTAAGTCTGCAGTTGAGTCATTTACTTCAGA
TAAGTATATTATCTCGCAACTTATTATGTNATACGTTATAACTTATATAGATATCAGAANGTATACTTGGCGTATATGGGCTCATGCTTATGAAATCTAN
TACAAGTACCTAAATACTCCTCNAATAATGCTTGGCTGCTATCGTAGACCTTACGCAAGTATATGAANTCCTANGTGCATTAGTGACAACAGATAATCGT
GATAATGTCGTGCGTGTGTGCGAGTTTGACGCTCTTTGTGATGTACTATCTCTTCGCTTCATGTGTATACATGTTGGGAGTACTCGTTATCTGTCCTCTA
GATCTCTGATATCCTTATGTCTATTGCTGCAATCCTGGCTTCTCTTTCAAGTGTCCTCCGAGTGTCTCTTATGTAGAGGTGTTGACTGTTTCTCGTGCTA
AGTACAATGCCTGCGATTATATGTTGTTGATCTCTTANCTGGNTGACACTGTCTACTTATTGCACTATCTGAATTGCTTATTATGTATTGACTAGATTGC
TCTTATATTATCTACCTCA
>LE_HBa0186M17_T7_66273 (trimmed for quality and cloning vector)
TGAC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.32492
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0186M17
Clone
Clone name
hba-186m17
LE_HBa0186M17
C08HBa0186M17
P186M17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found