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Clone Read LE_HBa0130J08_SP6_64574

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0130J08_SP6_64574
Primer
SP6
ID from Seq. Facility
LE_HBa_130_J08-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
434 trimmed for vector and quality, 1010 raw
Genbank Accession
DU074815
Sequence
>LE_HBa0130J08_SP6_64574 (raw untrimmed)
CCCAGGTTTTTTCTTCCAAAAACCAATAAAAAAAGAATCTTTAGCAAGGAAGGTTTTTTTTTTTTCTGTAAGTATTTCTGGTGTGCCACTTCTTGGTGTA
TATAGTTGATTTTTTATGATATACTGAAGATGGGTGTGGTTAATTTTTTTTATACAGCTATTGGGTTGCTTTGAACTGTTTTTTGTTGAGTTGACAGGGT
ATCGAAAATAATTTTTTTATTTATCTTTTTCAAATTTTACTTTGTGAGATTATATTGGATTGTTGTTTTACTTTGATTGGTTGTGGTTTATTTATTAGGT
GTATTTTGTAAAAGATTCTGGGTTTCACTTATAGTTACCATTCAAAGCAAAATATTTTTAGTGTGGTTATTGAAAAAGCTTCTGTTTTTCCTCCTTTTGT
CTTGTTTCTAGTGTGCCACTACCTCTGTATGTAAGTCTTCTTGAAAGTTGAAACGGAAAGTGTGTAATTTACAACCTTCTGAATTCTATTTTGTCTGGTC
TATTGGTCAGGTTCTGTAAAGATTCGGTTTTTTGCTGAGTTTGTTCGAATAATTTCTGTTGTGCTTTACCCATGGATTTCTCTCTAATTCTTTCTGGGGC
TGCCATGCGATTTTTAAGTGTTCTTTTGTGACACACGGTCGTCCTTTCACCCTTGCTATATCTTGTGTTAAACCATCAAGTTGAAAAAAGGAAGAAAGTA
ACTATATAGTTGAGTTCTTCTGTATAATTACCTTTTCTCTATAATGAGTTATCACGCTGCTTTCTGAGTCAATATTGTGCTTCCACTTATCCCTACGCGC
ATTTAATCTTTACTATTATAGTATCGACTATCAAATAGCTTCCATTATAAATACTATCCTCTAGAGGTAAAATGAATACATTGAAGAAACACTTTTTCTA
TCTAGAAACACTTTCTACTAACAAATGCTGTTTGATTTTTTATTGTCCCCATTGATGTTGATCACTTAAATAAAAAAAGCAAACAGTCTAACGCGTCCTC
CCAAATACCA
>LE_HBa0130J08_SP6_64574 (trimmed for quality and cloning vector)
ATAAAAAAAGAATCTTTAGCAAGGAAGGTTTTTTTTTTTTCTGTAAGTATTTCTGGTGTGCCACTTCTTGGTGTATATAGTTGATTTTTTATGATATACT
GAAGATGGGTGTGGTTAATTTTTTTTATACAGCTATTGGGTTGCTTTGAACTGTTTTTTGTTGAGTTGACAGGGTATCGAAAATAATTTTTTTATTTATC
TTTTTCAAATTTTACTTTGTGAGATTATATTGGATTGTTGTTTTACTTTGATTGGTTGTGGTTTATTTATTAGGTGTATTTTGTAAAAGATTCTGGGTTT
CACTTATAGTTACCATTCAAAGCAAAATATTTTTAGTGTGGTTATTGAAAAAGCTTCTGTTTTTCCTCCTTTTGTCTTGTTTCTAGTGTGCCACTACCTC
TGTATGTAAGTCTTCTTGAAAGTTGAAACGGAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.881147
Expected error %
0.531561
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0130J08
Clone
Clone name
hba-130j8
LE_HBa0130J08
P130J08
Clone type
BAC
Contamination
none
Estimated length
135,113
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found