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Clone Read LE_HBa0048N19_SP6_64020

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0048N19_SP6_64020
Primer
SP6
ID from Seq. Facility
LE_HBa_048_N19-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
497 trimmed for vector and quality, 829 raw
Genbank Accession
DU072153
Sequence
>LE_HBa0048N19_SP6_64020 (raw untrimmed)
GCTTTTTTGCTTTTCATTTATTCAACGCATTATAGGTATAGCAAGAGGAGGAAGTCAAAAATATAGTTATTGCACTCCAAGTGTCACATTCACCAGCTAC
AAGATCAAGTGGTTAAAACTATGACACACTCAATTTTAAGTTGAGCTCGGAGTTTGGTCAATAGTAACTATATGAAGATCTCAACTGAAAAATTATTCCG
GAGTGAATCTGTCTGAGGCATAGATTACTCCTCTACTTATGATTCACCCACTAGAAATGATTAAAGGAGACGGAGAAGCAAGGACAATCATCAATACTAA
ATATTATCAAGGAAACATGAACAGAGCAATTATTATCTTAATGGACAATGAGTTCTAGTAAGCAGGCGTGCTATTTAAAAAGTTAATCAAATGTCACAAT
GTCGTTATTTTGACTAGCACAAGATTTAAGGCCTACGATCAATAGTTAAGATCTTTCTTGAGCCAAATGAATCTTCTTTCAAATTGTAAAATAACAGTAA
GAACTATTCCATTTTTGGAGTAACAAAAACATACGTTCAAATATTCACAAACCTCCTGATTTAACCTCAAAATAATTACTCCTAGAAACGAGAATCCAAA
GAAAAGCAAAGTTAAATACGAGAAAACGGCCTTTATGGAATAACTTCTTATGAGCTTATGCAATCAAACTGTGAGTCGATCACTGAAGAGAATAAAATAA
TTTGGTCTAGTAAAAGTAAGAAAACGGATTTGATCCTTGAATTTACCCAAACAATCTAGATTTTTTGTCTTCTATTAATGGAATTTGTTTGTTAAAGTTG
TCTTGAAATGGTTCCTCTTGACTTTTCCT
>LE_HBa0048N19_SP6_64020 (trimmed for quality and cloning vector)
GTATAGCAAGAGGAGGAAGTCAAAAATATAGTTATTGCACTCCAAGTGTCACATTCACCAGCTACAAGATCAAGTGGTTAAAACTATGACACACTCAATT
TTAAGTTGAGCTCGGAGTTTGGTCAATAGTAACTATATGAAGATCTCAACTGAAAAATTATTCCGGAGTGAATCTGTCTGAGGCATAGATTACTCCTCTA
CTTATGATTCACCCACTAGAAATGATTAAAGGAGACGGAGAAGCAAGGACAATCATCAATACTAAATATTATCAAGGAAACATGAACAGAGCAATTATTA
TCTTAATGGACAATGAGTTCTAGTAAGCAGGCGTGCTATTTAAAAAGTTAATCAAATGTCACAATGTCGTTATTTTGACTAGCACAAGATTTAAGGCCTA
CGATCAATAGTTAAGATCTTTCTTGAGCCAAATGAATCTTCTTTCAAATTGTAAAATAACAGTAAGAACTATTCCATTTTTGGAGTAACAAAAACAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.943883
Expected error %
0.525397
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0048N19
Clone
Clone name
hba-48n19
LE_HBa0048N19
P048N19
Clone type
BAC
Contamination
none
Estimated length
207,112
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found