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Clone Read LE_HBa0012N02_SP6_6386

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0012N02_SP6_6386
Primer
SP6
ID from Seq. Facility
LE_HBa_012_N02-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
697 trimmed for vector and quality, 848 raw
Genbank Accession
DU025860
Sequence
>LE_HBa0012N02_SP6_6386 (raw untrimmed)
AAATGCTCTTCGTTACCTATGTANCANNNNNNNNNNNNGANGCAANGCNNNCCNCNCACTGACNAGGATGATGATGATGATGACTCTGATGACGATTTTA
GTGATGATGATGAAGAGATGCAGTCACCCCTTGATGAGGTGGACCCTTTCATTTTCTTTGTGGAAACAATTAAAGGTATGATGCTCTGCTTGCCTATTTT
GTTTTCAGAAATGACTTTTTGCTTGGTATGAGGCAATGGGCTCACTTATTTCGTCCCTTCTAACATTGGACTGTTGGATCCAGCTATGCAAGCATCTGAT
CCAGTGAAGTTCCAGAGCCTGACCCAGACTTTGGACTTCCGTTATCAAGCATTGGCAAATGGTGTTGCTGTGCATGCTGAGGAGAGAAGAGCAGAGATAG
AGAAAGAAAAATTGGAGAAGGCGTCAGCAGTAGTTGCTTCATGATTTTGGTCAACCGGTTTGCTTTTGGCCAAAACTCAATGAGTGATCATCCCATTATG
AGCCTTGGTTACCGAGGGCAGAAGATGAACTTGCAGCTAGGCCTGCTTTTTCTTTTGCTGTGTGGTCTTGATGAGTCGCCGTGAAGTGGGCTATTCTATG
TCAGAAGATGCCCTTCTTTGCTGGATGTCATTGTCTTTTTTCCCGAGTGTCTTGGTAGTAGTTCATTTTTATACAGATGAAAACGTTAGGATTATTCATT
GGTGGCCTTTCTATTTGGTATAGGAGGGTTTGGGGGTTGAGGGATGGTCGTAAATGCACACAGCCTTTATCATGTATTATATTTTGTTTGGGTACCAGAT
GATGCCTATTCTGTCTGAATTTGGGTGAATTACTACCCTTAAAAGTTT
>LE_HBa0012N02_SP6_6386 (trimmed for quality and cloning vector)
AGGATGATGATGATGATGACTCTGATGACGATTTTAGTGATGATGATGAAGAGATGCAGTCACCCCTTGATGAGGTGGACCCTTTCATTTTCTTTGTGGA
AACAATTAAAGGTATGATGCTCTGCTTGCCTATTTTGTTTTCAGAAATGACTTTTTGCTTGGTATGAGGCAATGGGCTCACTTATTTCGTCCCTTCTAAC
ATTGGACTGTTGGATCCAGCTATGCAAGCATCTGATCCAGTGAAGTTCCAGAGCCTGACCCAGACTTTGGACTTCCGTTATCAAGCATTGGCAAATGGTG
TTGCTGTGCATGCTGAGGAGAGAAGAGCAGAGATAGAGAAAGAAAAATTGGAGAAGGCGTCAGCAGTAGTTGCTTCATGATTTTGGTCAACCGGTTTGCT
TTTGGCCAAAACTCAATGAGTGATCATCCCATTATGAGCCTTGGTTACCGAGGGCAGAAGATGAACTTGCAGCTAGGCCTGCTTTTTCTTTTGCTGTGTG
GTCTTGATGAGTCGCCGTGAAGTGGGCTATTCTATGTCAGAAGATGCCCTTCTTTGCTGGATGTCATTGTCTTTTTTCCCGAGTGTCTTGGTAGTAGTTC
ATTTTTATACAGATGAAAACGTTAGGATTATTCATTGGTGGCCTTTCTATTTGGTATAGGAGGGTTTGGGGGTTGAGGGATGGTCGTAAATGCACAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.962888
Expected error %
0.0896363
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0012N02
Clone
Clone name
hba-12n2
LE_HBa0012N02
P012N02
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found