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Clone Read LE_HBa0042P08_SP6_63326

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0042P08_SP6_63326
Primer
SP6
ID from Seq. Facility
LE_HBa_042_P08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
699 trimmed for vector and quality, 801 raw
Sequence
>LE_HBa0042P08_SP6_63326 (raw untrimmed)
GCTTTTTTCAACTTGATTCTTATAACACTTAACTAATGTCGGTAAAGACTTTAGTACTCTTTATTAATATCACTATTTATTTCTGTTAAAAATTATTTTT
GTTATGGTGAATACAATAAAAAATAAATATGTTTAATAGACTTTAGAATACTCAATAATGAGAGAATAAGAATATAAAGAGGAATAAAAAAGGTAAAATG
TTAAGAATAATAATGTGAATTTATGATAATTGCCAAGATATAAATTAGTCAACAACATAAGTAGTCACCTAAGAGAAAGAACGTTATAATTGACTACACG
CTATTTCATTTCTCAATTATTACAACGATATACACATTAAATAGAGTAAAAGAATTACTATTTATATTTTCTATCCAAAAAATTCTTTAGAAAAAATTGA
GGGGTCCTAAAAAATTTGATATCCCAAGCAGTTGTTTTATTGGTCTTATGATCGAGATGACCTTGATAATTTCATCCTGAAAACATTTGTTATAATTTAG
ATAAATATGAAAGGGATAGGAGTGTGGCATGGTGGATTGAAGGACGAGGAGAACACAATTAATATGGAAAGTCACATATGAAACTTTTTTTTTTCATTTT
TATTAAGGAAGTAATTTTTTCTAGTCGTAGGAACTTATTTTTCTAAAGAAAATGTTATAACAATTTTATTGACCAGCCGAACATGATTTTTAAAAAAAAA
TAAAAGTACTAATTTCCTCTAAACCGAACACATCATATGAATTTTGAGTTCCTCTCCCATCACACCTTGTTTAATTTCCTCATTTGAAAATTGGTAATTT
A
>LE_HBa0042P08_SP6_63326 (trimmed for quality and cloning vector)
ATTCTTATAACACTTAACTAATGTCGGTAAAGACTTTAGTACTCTTTATTAATATCACTATTTATTTCTGTTAAAAATTATTTTTGTTATGGTGAATACA
ATAAAAAATAAATATGTTTAATAGACTTTAGAATACTCAATAATGAGAGAATAAGAATATAAAGAGGAATAAAAAAGGTAAAATGTTAAGAATAATAATG
TGAATTTATGATAATTGCCAAGATATAAATTAGTCAACAACATAAGTAGTCACCTAAGAGAAAGAACGTTATAATTGACTACACGCTATTTCATTTCTCA
ATTATTACAACGATATACACATTAAATAGAGTAAAAGAATTACTATTTATATTTTCTATCCAAAAAATTCTTTAGAAAAAATTGAGGGGTCCTAAAAAAT
TTGATATCCCAAGCAGTTGTTTTATTGGTCTTATGATCGAGATGACCTTGATAATTTCATCCTGAAAACATTTGTTATAATTTAGATAAATATGAAAGGG
ATAGGAGTGTGGCATGGTGGATTGAAGGACGAGGAGAACACAATTAATATGGAAAGTCACATATGAAACTTTTTTTTTTCATTTTTATTAAGGAAGTAAT
TTTTTCTAGTCGTAGGAACTTATTTTTCTAAAGAAAATGTTATAACAATTTTATTGACCAGCCGAACATGATTTTTAAAAAAAAATAAAAGTACTAATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.896818
Expected error %
0.175913
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0042P08
Clone
Clone name
hba-42p8
LE_HBa0042P08
P042P08
Clone type
BAC
Contamination
none
Estimated length
104,410
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found