Clone Read LE_HBa0042O05_SP6_63272

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0042O05_SP6_63272
Primer
SP6
ID from Seq. Facility
LE_HBa_042_O05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
313 trimmed for vector and quality, 857 raw
Sequence
>LE_HBa0042O05_SP6_63272 (raw untrimmed)
ATTTTTTTTTTTTAAAGCCAGTTTATTGTATCTATTCTATACTTCTCTCTTATGCATAGTTATTCTCCCTTATTTTCCTTCATAAATTTATCTTTGAGAA
GTAAAAATTGCACATTAAGATATAATCTTCATGGGTTAAATTTAACCCATAAAATGCATTTGGCAAAGAACAAGAAGACATCTGATATCACGAAGGATAC
AAACTTCACTTCTAAACAAGTTAAGAGTTCGAATTTGTGAACTACTGATCATATTGCCCCATCTAAGCTCAGCACACATACCATAATCAATTAAATTGCT
TCACAATTCCACATGTTCTTGTAAACAAATAATGCACCATGAAATCATATACAACACACACCGAAGGATAAAAGATACAACAACAAACAAGGAACTTTTT
TCTTGTACAGGTACAAAAACAAACTAGGCTCTGTTACAGCTCGATGGGATAAGATAATACTACTATGTCATCACCCCCTACACGAGACCAGTGTATAGCA
CACCTTTGCCTTACAAAGGTAGGATATGATCTTATGACTTACAATAGCTACATCCGCAAGTAAATATTCATCAAGGCTCCATCATCCTCTCTTCTGTCCC
ACTGACGCTCCTGTTTTTTTCATCATGTATATCTTAATCACTTCCTGATCTAATCTTCGTCCCTTTCTCTTGCATCTTACCTGTCCCTTATATCTCATTT
CCCTCGTTCCTCCCCCAACTCACTCACTTTAATTGCACATCCCACAACTTCATCCTATATTCAATACAGCAATAAAAGTATAATACTCATACAGCATTTT
TCTTATCCCTTTTCAAAATCTCAAACTAATCCTCTCTAGCCCTACTTTGAAACAATG
>LE_HBa0042O05_SP6_63272 (trimmed for quality and cloning vector)
TCTCTCTTATGCATAGTTATTCTCCCTTATTTTCCTTCATAAATTTATCTTTGAGAAGTAAAAATTGCACATTAAGATATAATCTTCATGGGTTAAATTT
AACCCATAAAATGCATTTGGCAAAGAACAAGAAGACATCTGATATCACGAAGGATACAAACTTCACTTCTAAACAAGTTAAGAGTTCGAATTTGTGAACT
ACTGATCATATTGCCCCATCTAAGCTCAGCACACATACCATAATCAATTAAATTGCTTCACAATTCCACATGTTCTTGTAAACAAATAATGCACCATGAA
ATCATATACAACA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.916071
Expected error %
0.808775
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0042O05
Clone
Clone name
hba-42o5
LE_HBa0042O05
C12HBa0042O05
P042O05
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found