Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0042F02_SP6_62834

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0042F02_SP6_62834
Primer
SP6
ID from Seq. Facility
LE_HBa_042_F02-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
612 trimmed for vector and quality, 789 raw
Sequence
>LE_HBa0042F02_SP6_62834 (raw untrimmed)
GTTTTTTTTTGAGTATGGTCAGTTGAGGAAGCGCTTAGATTGTACCTAGGCATGTTGGTTTCAAAGTCCCACCAGAAGATATGACCCTTGTAGGTTGTGT
CTTGATTTGCCTCAACCTTTTGTTTAAGGGAATGATGTGATTAGGCTTACCCCAAGTGGGTTTAATGTGCATAGTGGTAAGATTTTTAAGTTCCCTTTGA
TGTCCGTATTTTGAGTTTCCTTGAGCTTATATAGGTTGAGTTTAACTCTGTAGTGATTGTAAGCAGGGTGTTCATAAGATTACGTCCCAAGAGAGGGATG
ATGTGCTTACTTAATAAGGTCGGTAAGTTAAGATTCCCCTAGAGTTGGGATGAGTTGCTCTTAAATGTGTTTATCCTAAGTGGGGGAGGATGACTTAAGT
AGTAAGGTTGTAGATATCTCTATCTTTTCTTTCTATTCTTACTCAGACTTAAAACCAAAGATTTCCTAGGTATTTTGTTTATCATATGAGTCTTAAATAA
AAGATCCTAAGTGTGGGAGGATGATTTGAGTAGTAAGGTTTATGTATTCTTACTAAAACATAAAACCAAAGATTTTCTAAGTAGTTTGTTCATGATAGGA
GTCTTTTATTAAAGGATAACTTGCATTTTTCTCCAAATAATATCATGTTATTAATGACAATATGTTATGTATATTATGAGAGGTCATTATTCCATGAAAC
AGGATTTTCATATAAATTTGCGCTTTGCCCATTCATTTATTGTTCCCTTTATTTACTCATTCTCCTTCCTACACCATGTTAACGCCTAA
>LE_HBa0042F02_SP6_62834 (trimmed for quality and cloning vector)
CAGTTGAGGAAGCGCTTAGATTGTACCTAGGCATGTTGGTTTCAAAGTCCCACCAGAAGATATGACCCTTGTAGGTTGTGTCTTGATTTGCCTCAACCTT
TTGTTTAAGGGAATGATGTGATTAGGCTTACCCCAAGTGGGTTTAATGTGCATAGTGGTAAGATTTTTAAGTTCCCTTTGATGTCCGTATTTTGAGTTTC
CTTGAGCTTATATAGGTTGAGTTTAACTCTGTAGTGATTGTAAGCAGGGTGTTCATAAGATTACGTCCCAAGAGAGGGATGATGTGCTTACTTAATAAGG
TCGGTAAGTTAAGATTCCCCTAGAGTTGGGATGAGTTGCTCTTAAATGTGTTTATCCTAAGTGGGGGAGGATGACTTAAGTAGTAAGGTTGTAGATATCT
CTATCTTTTCTTTCTATTCTTACTCAGACTTAAAACCAAAGATTTCCTAGGTATTTTGTTTATCATATGAGTCTTAAATAAAAGATCCTAAGTGTGGGAG
GATGATTTGAGTAGTAAGGTTTATGTATTCTTACTAAAACATAAAACCAAAGATTTTCTAAGTAGTTTGTTCATGATAGGAGTCTTTTATTAAAGGATAA
CTTGCATTTTTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.932499
Expected error %
0.237657
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0042F02
Clone
Clone name
hba-42f2
LE_HBa0042F02
P042F02
Clone type
BAC
Contamination
none
Estimated length
103,543
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found