Clone Read LE_HBa0042E11_SP6_62804

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0042E11_SP6_62804
Primer
SP6
ID from Seq. Facility
LE_HBa_042_E11-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
695 trimmed for vector and quality, 829 raw
Sequence
>LE_HBa0042E11_SP6_62804 (raw untrimmed)
TTTCGAAACTGTAATTGGTCTATCTAATTGCTTTGCTAAGAAAAATGGGATTTCGAGAGGTGGATCAGATGGATCGAATTCAGCATCATGACAGTGAAAG
GCCTGTGGAAAGGTGATCCACCATCACCATTTCTTTTCATACTTCCATGGACGCTTTAGCAGACTGTTGGATCCAAGAAACTGCACTGGCTTAATGACTT
TGATGTGGGAAGAAGTCCAGGGTTCAGTCAATATCTCCGACATACTGTATGCCAATGATACACTATTATTCTGTCGGGTGATACTAACCAGGTTTCTACC
TGAACATCACTCTGCTCATTTTTGAGGTTCCATCAGGACTACACATGTACAGATCTACTTGCTCAAAAATCTTAATATTCTGTTAATCAGGTACCCAACC
TAGGAAATCTAGCAGAAGTCGTTTGTTGTAATACTGGATCTATCCCAACCTCCTATTTGGGCCTACCACTAGGTGCAAAATTCAAAGTTGAAAACTCCTG
GAGTGGAGTGGTTGAGAGTTTGAAAGGAAACTAACCTCATGGCAGTTGCAGTATTTTTGAATGGGTGGAAGGCTCACACTTATCAATAGTACACTAGATA
GCATCCCAACATACCTGATGTCATCATTCCCTATTTCCAAAAGAGATTGTAAAGCAATTACACAAAATCAGAAGGGACTTCTTGTGGCAGGGAAACAAGC
GCCACAAAGTCCACCTGGTTAAGTGGTCTAAATGCCTATGCCTAAGCTATAGGGTGACCTGGGGATCAAAAATTTGGCTAAACCATAACAAGAGCTTACT
AGTGAAATGGCTATGGAGATGTGCACAAA
>LE_HBa0042E11_SP6_62804 (trimmed for quality and cloning vector)
TATCTAATTGCTTTGCTAAGAAAAATGGGATTTCGAGAGGTGGATCAGATGGATCGAATTCAGCATCATGACAGTGAAAGGCCTGTGGAAAGGTGATCCA
CCATCACCATTTCTTTTCATACTTCCATGGACGCTTTAGCAGACTGTTGGATCCAAGAAACTGCACTGGCTTAATGACTTTGATGTGGGAAGAAGTCCAG
GGTTCAGTCAATATCTCCGACATACTGTATGCCAATGATACACTATTATTCTGTCGGGTGATACTAACCAGGTTTCTACCTGAACATCACTCTGCTCATT
TTTGAGGTTCCATCAGGACTACACATGTACAGATCTACTTGCTCAAAAATCTTAATATTCTGTTAATCAGGTACCCAACCTAGGAAATCTAGCAGAAGTC
GTTTGTTGTAATACTGGATCTATCCCAACCTCCTATTTGGGCCTACCACTAGGTGCAAAATTCAAAGTTGAAAACTCCTGGAGTGGAGTGGTTGAGAGTT
TGAAAGGAAACTAACCTCATGGCAGTTGCAGTATTTTTGAATGGGTGGAAGGCTCACACTTATCAATAGTACACTAGATAGCATCCCAACATACCTGATG
TCATCATTCCCTATTTCCAAAAGAGATTGTAAAGCAATTACACAAAATCAGAAGGGACTTCTTGTGGCAGGGAAACAAGCGCCACAAAGTCCACC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.974611
Expected error %
0.0819636
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0042E11
Clone
Clone name
hba-42e11
LE_HBa0042E11
C02HBa0042E11
P042E11
Clone type
BAC
Contamination
none
Estimated length
86,200
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found