Clone Read LE_HBa0042C04_T7_62695

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0042C04_T7_62695
Primer
T7
ID from Seq. Facility
LE_HBa_042_C04-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
786 trimmed for vector and quality, 923 raw
Sequence
>LE_HBa0042C04_T7_62695 (raw untrimmed)
AAGGTTCGGTCCCGGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCTCTCAAGATCATATGTTCTCCTTGGACAGCTTTACATGAAGCATGCC
TTGCATAGGATACCCTCTACAGAAGGAAAATTCAGAGTCAGTAGATGCTTCATATGCCTAATCAAATTAGATCCCAATCGACTTCTCTTGCTTCACTTCA
CAATCATCACAGATATTTGGGGCATGTTTTTCTCTATTTTCGGTCTTAAAGCATAAAAGAGGCCTATGAACGCTGGTCTAAATCGAAAGTTGATTAGTCC
ATCGCAGATGATTCCTGCCTTATCTTTTGAGGACAGAAAAGAATTATAGATGTTTTTATGGGATTTCAACACCTACTTATTTTCTGAAGGTCTGTTATGG
TTGTATAGTTTGCAGAATCTCTCCCCTGTAAATTGTCCTATTAATTTTTTGAACTTCATCAGCTCTTTAGCATTAGCTTAGGCTTTGTGGCCTATGGCTG
ATTATCTTTTGTGCTTCTGATCAATGTCAAACGGATTGGTAGAAGAAATGGTGAGAAAGACAGAGACAGAAAGGAACTCAAAATATTTTTGAAGACAAAA
GCAGTTATATTTAGAAGATCAAGATGAATCGTCTTTCTTTGTGCTATTTTTGGTGTACGGGATCTTTTTGATCATATATGGGACTGGATAGATTTAATAG
GTGGCTTGCAAGTGACTGTCACATCAGGCTTCCCTTTTTTTCTCTTTCTGAGTTGTACATACAGTTCTCAACCCCTGCCAAGGGCTGACTTTAAGTATCA
TAACAAGCCTGTTACCTTCCTTTTGGAAAAAAAATGCCGCTTATGAAGGTTCTAACATTGTACTTTCTAACGGGTGATGTCTGCCTTTCCGTTAATTGGC
AGGGCGGCTTTCAAGAAGGAAAC
>LE_HBa0042C04_T7_62695 (trimmed for quality and cloning vector)
AGCTTCTCTCAAGATCATATGTTCTCCTTGGACAGCTTTACATGAAGCATGCCTTGCATAGGATACCCTCTACAGAAGGAAAATTCAGAGTCAGTAGATG
CTTCATATGCCTAATCAAATTAGATCCCAATCGACTTCTCTTGCTTCACTTCACAATCATCACAGATATTTGGGGCATGTTTTTCTCTATTTTCGGTCTT
AAAGCATAAAAGAGGCCTATGAACGCTGGTCTAAATCGAAAGTTGATTAGTCCATCGCAGATGATTCCTGCCTTATCTTTTGAGGACAGAAAAGAATTAT
AGATGTTTTTATGGGATTTCAACACCTACTTATTTTCTGAAGGTCTGTTATGGTTGTATAGTTTGCAGAATCTCTCCCCTGTAAATTGTCCTATTAATTT
TTTGAACTTCATCAGCTCTTTAGCATTAGCTTAGGCTTTGTGGCCTATGGCTGATTATCTTTTGTGCTTCTGATCAATGTCAAACGGATTGGTAGAAGAA
ATGGTGAGAAAGACAGAGACAGAAAGGAACTCAAAATATTTTTGAAGACAAAAGCAGTTATATTTAGAAGATCAAGATGAATCGTCTTTCTTTGTGCTAT
TTTTGGTGTACGGGATCTTTTTGATCATATATGGGACTGGATAGATTTAATAGGTGGCTTGCAAGTGACTGTCACATCAGGCTTCCCTTTTTTTCTCTTT
CTGAGTTGTACATACAGTTCTCAACCCCTGCCAAGGGCTGACTTTAAGTATCATAACAAGCCTGTTACCTTCCTTTTGGAAAAAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.953933
Expected error %
1.34263
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0042C04
Clone
Clone name
hba-42c4
LE_HBa0042C04
C02HBa0042C04
P042C04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found