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Clone Read LE_HBa0042B11_SP6_62660

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0042B11_SP6_62660
Primer
SP6
ID from Seq. Facility
LE_HBa_042_B11-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
238 trimmed for vector and quality, 1002 raw
Genbank Accession
DU072280
Sequence
>LE_HBa0042B11_SP6_62660 (raw untrimmed)
TATGTCACCTCATATTTGAAGGCTATGACATTTAGTGAATACTTCACTTGTTTAATATTTCTTTCATTTTCCAAAGTTCATCTCTAAAAGTTTCTTTCTA
ACACATGTGTGCACCTGTTTTCAGATAATCATGCATCCACAAAAAGCAGTATGAGGTCATGCAGCTAGGAGGAATATAAAGGTACCCAAGTTGCACAATG
CACCTGACATGCAACCGCAAGGAGAAGTTTCTAATTTTGAGTTTAGAGAGGCAATAAGGATGCTCAGCCAAGTTGTGACCAATCAAGTTGGGGATCATAA
AGGAGCTTGAAAAAAAGAGTGAGACACCTCTATGATACGTGAGATCATTAAGATGAATCCTTAAATTTTTCTCTCTTACGAGCATACATACCATAATATT
ATAAAAAATATTTGATATAATGATCAGATGGTTTTGGATATATATGATCTGTTGATTGACTGGTTAGATGAGCTAAATCGTTTCTGTGTTTTCTTGTTTG
ATACAATAGTAGCCGGGTATAGTCGGTATTAGTTCAATGTCTATAAGAGAGGACCGATTATGAAACTATAGCTCTAACATTCCGTGGTTTCGTTTTGTGT
TCTTGTTTATACTCAGTCTCTTTGTGCGTCTCTTCTAAAAACATTTTCTGCTTATTCTGTAATTATTTTTTTATTTTTTTTGGTTTTTCTTTTTTTATAT
TCTCTTATTGTTGTCTGTATCTTGACTTCTATTTAGTCTTCGTTATCTTTTTGTTTATAGTCTTGTATGTTAGATTCTGAGGTCTTCTATTATGTGGGCT
TTGCTATGTCCATCATCTCATAATGATTGTCTATTGTTAACAATTAGCGTCGAACTACTAACATCTAATGGTGTAGTCTTGTGTTGTTGTTTAGCTATGT
TAAGAGGTCATACGTTATCACTTATTGCCTCGCATGTTCGTGTATGGATTCATGACGTATACTATTACTGCTCNGACGTTTGTAATCAGACAAGAAATCT
AC
>LE_HBa0042B11_SP6_62660 (trimmed for quality and cloning vector)
GGCTATGACATTTAGTGAATACTTCACTTGTTTAATATTTCTTTCATTTTCCAAAGTTCATCTCTAAAAGTTTCTTTCTAACACATGTGTGCACCTGTTT
TCAGATAATCATGCATCCACAAAAAGCAGTATGAGGTCATGCAGCTAGGAGGAATATAAAGGTACCCAAGTTGCACAATGCACCTGACATGCAACCGCAA
GGAGAAGTTTCTAATTTTGAGTTTAGAGAGGCAATAAG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.94528
Expected error %
1.01035
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0042B11
Clone
Clone name
hba-42b11
LE_HBa0042B11
P042B11
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found