Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0039G09_SP6_62128

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0039G09_SP6_62128
Primer
SP6
ID from Seq. Facility
LE_HBa_039_G09-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
488 trimmed for vector and quality, 804 raw
Genbank Accession
DU071266
Sequence
>LE_HBa0039G09_SP6_62128 (raw untrimmed)
CACCGCCCAAGGTGCCCAAATAGCCTAATATTATGAAGGGAACTCAAAATACCTCTCCCATCCAACTGAATCTAAGAATTTCATTGAAGGTAACGACAGA
GAAAGAGAATGAATGCGAGTATGAACTTCTGGTACTGGAAACAAAGGAAACTTAGGTTCATCTTCAACCTTGAGGCCGAGTTCTTCAAGATTCGGAAACC
TCCACCACAACCTTGCATTCATATTATCCAGCCGTACATTGCTAGTGCGAAAAGTCTTCATGTTCTCTAGCATACTTGTTTTAAAACCTCCTTCGTCATT
AATGTCTTCCCATACCACCTGAAAACTGTATATATTCACATGCCTTAGCTTCTTCATTTCCCATAAAGTAGCAGCCCTAAGGCGTATACCCTTATTACTT
GACTTGACCTGCAGAGTTTGGAGATTGTGTAGGTGTGATATCCACTCCAATTCAAACTGTCTGACACAAATTGCAAGGTACCTCAACTCAGATAGTGATT
GAATTGCAGTAGCCCATGAATCTGGCAATGCTACATCCATCAAATGCAACGCCCGAACAAATCTTAATTTTAACAATCAAATCTTAAGGATTCCATTATT
GGTTATTCCATGTTTTCTGTTTTGGATAGCCTTGATCTCCAATCAATTGGTTTTCCTTTTAATGAATCTTGATATCTTATCCGTCTGGTAATTCGGGGAT
ATTCATATTGTTCTTATAAACCCTCTAGTATTAGAAAATGGTTTACTCGTTATTCCGTGGAATTCATTATATCAATTTTTTTTTGCTCTGGAGCTTTTTT
TTTC
>LE_HBa0039G09_SP6_62128 (trimmed for quality and cloning vector)
AGGGAACTCAAAATACCTCTCCCATCCAACTGAATCTAAGAATTTCATTGAAGGTAACGACAGAGAAAGAGAATGAATGCGAGTATGAACTTCTGGTACT
GGAAACAAAGGAAACTTAGGTTCATCTTCAACCTTGAGGCCGAGTTCTTCAAGATTCGGAAACCTCCACCACAACCTTGCATTCATATTATCCAGCCGTA
CATTGCTAGTGCGAAAAGTCTTCATGTTCTCTAGCATACTTGTTTTAAAACCTCCTTCGTCATTAATGTCTTCCCATACCACCTGAAAACTGTATATATT
CACATGCCTTAGCTTCTTCATTTCCCATAAAGTAGCAGCCCTAAGGCGTATACCCTTATTACTTGACTTGACCTGCAGAGTTTGGAGATTGTGTAGGTGT
GATATCCACTCCAATTCAAACTGTCTGACACAAATTGCAAGGTACCTCAACTCAGATAGTGATTGAATTGCAGTAGCCCATGAATCTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.966124
Expected error %
0.209049
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0039G09
Clone
Clone name
hba-39g9
LE_HBa0039G09
P039G09
Clone type
BAC
Contamination
none
Estimated length
118,251
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found