Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0039C13_T7_61945

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0039C13_T7_61945
Primer
T7
ID from Seq. Facility
LE_HBa_039_C13-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
191 trimmed for vector and quality, 741 raw
Sequence
>LE_HBa0039C13_T7_61945 (raw untrimmed)
TCCAAACCATATCTGACATATGCTGATTAAATAGGAATCACTTCCAATCACAATAACAAAATCATGCAACACCGAATGGCAAGAATAGAACTCATATTAC
ATCATCATAGTGC
AAGTATAAAACGCACAATTATGGACTTCGAAACACCAAAATTGACTATTGCACTAAAATTTAGAGCTTCTTAAAAAATCAGACTTAG
GAAGAGTTATCTAACCTCAAGAACTAAACAAGTGAGGGAACGGGATCTCATGTCGGACTCGGCCTCCCATGTGCTACCTCACAAGGTGGTTCCTCTTAAT
ACCTTTATGTGGCCCCTACTTGTCCTCCGCCGTTCACATGGTGATCTAAATTCAACAGGAACCTCTCTTAAGATATGTTCTCTCAACTCTATTCCTTCAC
AGTCATGATAATGATGGATACGAGACATTCTGATGCATCAACACGTATTACACGAAAAATAAACTTAATTATTTATTTTAAGATCATGAGATCTTCTCTC
GTTCTATATATCTAGGCCCTTTAAGTATCATAGTGTCGTACTAACTAGGCGAAATACTTTTGGATGACTTTCAGTTTACTGACACATCTAATGGAAAACT
CTCACCATTCTCTGTACTTGGTCTCTGTAGATAGTACCATAATATCTAGTTCCTTTCATTATTTNAAATGTATAACAATTATCTACTTCAAATACATTAT
ACTTACTACTTATCGTCGTACCATCATAATCTATATTCTCN
>LE_HBa0039C13_T7_61945 (trimmed for quality and cloning vector)
AAGTATAAAACGCACAATTATGGACTTCGAAACACCAAAATTGACTATTGCACTAAAATTTAGAGCTTCTTAAAAAATCAGACTTAGGAAGAGTTATCTA
ACCTCAAGAACTAAACAAGTGAGGGAACGGGATCTCATGTCGGACTCGGCCTCCCATGTGCTACCTCACAAGGTGGTTCCTCTTAATACCT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.944436
Expected error %
2.51764
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0039C13
Clone
Clone name
hba-39c13
LE_HBa0039C13
C04HBa0039C13
P039C13
Clone type
BAC
Contamination
none
Estimated length
54,781
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found