Clone Read LE_HBa0134G09_T7_60593

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0134G09_T7_60593
Primer
T7
ID from Seq. Facility
LE_HBa_134_G09-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
655 trimmed for vector and quality, 916 raw
Genbank Accession
DU072877
Sequence
>LE_HBa0134G09_T7_60593 (raw untrimmed)
TAAACCCGGGGTCCGGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCGAGGCAATCATGGAGAAGAACCTTTACTTCCCCCAATTTCCCACA
AAGTAAGCTCCGTAGTCCCTTAATGGAGCATTTTCCCTCCCCTGGTCTTAATGTGGCTGCCCAAACTGATTAGATGATAGCATATACATAAATGGATATT
CTCCAATTCCTTTATTTTGTTATTGTGTGTGTAAAGGTTGAGGAGATGATGTTTCAATTGGTGTGTGATCCATCTGGAGTGGTAGTGGAAACAACAATCA
AGGAACTTGTTCCAGCTTTAGTAAACTGGGGGAAGGAATTGGATCATTTACTACAAGTCTTACTATCTCATGCTTTGGGCTCTGCTCAGGTATGGATTCT
GCATTTACTTAGTTCTCCTCACTGAAGCAGTAACTTGTCTTAAACATGGAGCTGATATATTATCCCTCCTTCCAGCGTTGTCAACCACTTTCAGGGGTGG
AAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACG
CAAGAAAGCTATTGATACCTGTCCATTCCCATTGCGTTCGGACGATGAAAGACTAGTCTTTTCTATCTCAGTTCTCGAACAGTATTGCTGGGAAATATCC
CCTTTTACTCTACCCTGCCTTCTCAAACAATCCTTCTACTCCTCCTTCAAAGGCGCCTCTCCCATAGCCAGCTAATACTTGCACGATATTTCAATTTCCC
ATGCCGAGGAAATATGGAACCGCCTTCTTGTTTACTGGTTATCATATCGACTGCTATTCGCACATTATAGAACCTCCTCCTCATAACCTCACAGCGTACA
TATCTCCGCACTCACN
>LE_HBa0134G09_T7_60593 (trimmed for quality and cloning vector)
AGCTTCGAGGCAATCATGGAGAAGAACCTTTACTTCCCCCAATTTCCCACAAAGTAAGCTCCGTAGTCCCTTAATGGAGCATTTTCCCTCCCCTGGTCTT
AATGTGGCTGCCCAAACTGATTAGATGATAGCATATACATAAATGGATATTCTCCAATTCCTTTATTTTGTTATTGTGTGTGTAAAGGTTGAGGAGATGA
TGTTTCAATTGGTGTGTGATCCATCTGGAGTGGTAGTGGAAACAACAATCAAGGAACTTGTTCCAGCTTTAGTAAACTGGGGGAAGGAATTGGATCATTT
ACTACAAGTCTTACTATCTCATGCTTTGGGCTCTGCTCAGGTATGGATTCTGCATTTACTTAGTTCTCCTCACTGAAGCAGTAACTTGTCTTAAACATGG
AGCTGATATATTATCCCTCCTTCCAGCGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATG
GAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGCGTTCGGACGATGAA
AGACTAGTCTTTTCTATCTCAGTTCTCGAACAGTATTGCTGGGAAATATCCCCTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.968133
Expected error %
1.1672
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At5g16210.1 Score 99 E Value 8e-41 Identity 64.40% Align. Length 451bp (68.85%) Frame 3
68418.m01894 HEAT repeat-containing protein contains Pfam profile PF02985: HEAT repeat
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
emb|CAC01862.1| Score 99 E Value 3e-39 Identity 64.40% Align. Length 451bp (68.85%) Frame 3
putative protein [Arabidopsis thaliana] pir||T51491 hypothetical protein T21H19_130 - Arabidopsis thaliana
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAL47427.1| Score 99 E Value 3e-39 Identity 64.40% Align. Length 451bp (68.85%) Frame 3
AT5g16210/T21H19_130 [Arabidopsis thaliana] ref|NP_197125.2| HEAT repeat-containing protein [Arabidopsis thaliana]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0134G09
Clone
Clone name
hba-134g9
LE_HBa0134G09
C02HBa0134G09
P134G09
Clone type
BAC
Contamination
none
Estimated length
183,343
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found