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Clone Read LE_HBa0134B17_SP6_60368

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0134B17_SP6_60368
Primer
SP6
ID from Seq. Facility
LE_HBa_134_B17-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
670 trimmed for vector and quality, 854 raw
Genbank Accession
DU072684
Sequence
>LE_HBa0134B17_SP6_60368 (raw untrimmed)
CGGCCAGATTTAGGGTTAGAAGTTCGGGAGCACTCTCCGCATTCAAGTTATTTGATGTGAAGAATTTCTTATCTCAGACCGATACTTATGACCTTAGTTG
CACGTACTCTTCACTTACAATGCCACACCCGGGTTGTATTCTCCAAAAATACACTATTTTTGGAGAATCCGACACGCACACGTTGATATTTTGTAAGAGT
CCGAGCAACATAGCTTGACCAAGGCGGAAAAAATGATATCCTTCAAAATTCGAAAAGCCTAGACAAGATATGTATTATGAGAACATTTTCCCTCAAGACC
TAGGCTTTGCAGTCAATCTATTATCTAGTCTGTTTCAAGGATGCTCTTCATTTCCGATGTCTGATGTAATTTTATTTCTTAAGCACCTTTCCTAGTTGCC
TTGAGAATTGAAGTACTGAATTTTATATTTAGCAAGTGGTAATGAGAGAATCAAAATGCTAAGCTGTAGATACCAGTTCCATTCACCAGTCACAGATTTG
TGTTTTGTCAGTACCAGAAAGAAATTGTAAATCTTTAATTACAGATCTTTTTTGCTAGTGCATTAGGATTTCTGCCAATGGAAGTAATCTGCAGCTTTCT
ACAATCAACAGGGTGAACTAAGGTCATTGAAGTTAACATGATGCTATATTCCTTTCACTATTTTTATGTTGCCATCGTTACTTATATTTTTAGCTTTACA
GGTCTCCTTTAGATATGGCCTATTTTGTCGTATCTAATGCAAGATTGGTGCCTATCGTTAACGATGTTGCCATTTTTTTCAGCAAGCTACTGCTCAAAGG
CCCCTTGGCGGTGTCATACTACGCCCAAAAGAGAGGTATATAGGGATAAAATAN
>LE_HBa0134B17_SP6_60368 (trimmed for quality and cloning vector)
CGCATTCAAGTTATTTGATGTGAAGAATTTCTTATCTCAGACCGATACTTATGACCTTAGTTGCACGTACTCTTCACTTACAATGCCACACCCGGGTTGT
ATTCTCCAAAAATACACTATTTTTGGAGAATCCGACACGCACACGTTGATATTTTGTAAGAGTCCGAGCAACATAGCTTGACCAAGGCGGAAAAAATGAT
ATCCTTCAAAATTCGAAAAGCCTAGACAAGATATGTATTATGAGAACATTTTCCCTCAAGACCTAGGCTTTGCAGTCAATCTATTATCTAGTCTGTTTCA
AGGATGCTCTTCATTTCCGATGTCTGATGTAATTTTATTTCTTAAGCACCTTTCCTAGTTGCCTTGAGAATTGAAGTACTGAATTTTATATTTAGCAAGT
GGTAATGAGAGAATCAAAATGCTAAGCTGTAGATACCAGTTCCATTCACCAGTCACAGATTTGTGTTTTGTCAGTACCAGAAAGAAATTGTAAATCTTTA
ATTACAGATCTTTTTTGCTAGTGCATTAGGATTTCTGCCAATGGAAGTAATCTGCAGCTTTCTACAATCAACAGGGTGAACTAAGGTCATTGAAGTTAAC
ATGATGCTATATTCCTTTCACTATTTTTATGTTGCCATCGTTACTTATATTTTTAGCTTTACAGGTCTCC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.957503
Expected error %
0.251074
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0134B17
Clone
Clone name
hba-134b17
LE_HBa0134B17
P134B17
Clone type
BAC
Contamination
none
Estimated length
47,786
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found