Clone Read LE_HBa0127I13_SP6_59928

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0127I13_SP6_59928
Primer
SP6
ID from Seq. Facility
LE_HBa_127_I13-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
341 trimmed for vector and quality, 922 raw
Sequence
>LE_HBa0127I13_SP6_59928 (raw untrimmed)
GGCGGGGTTGTAAGTTCGGGGTTTGTTTAACGGGGCCTTTTCATATCTAGTAGTTGGTAGAAGGACCATCTTTTTAGTTGATTGGGAAAAAATTCATGGA
AAGGAAAAAATTCATTCGTTGTGATAGGAGTCATACTATATAGTAATAAATCTAGTTAGCTATAAACACTAAAGTTATGACAGTGGGTGTCTTTTCAATT
TTTTAAAATTTCTTGAAAATTTCAATTGTATTGGTGTATTTAATTGGATAAGAAGTGTTGCAATTCAAGAATATGATATTATGATATGGCTATGTCCTAC
AATTAAAAGACTTCCAAATATATTGTTAACACAAAGATCATTCTAATGAAGAATATAGGCATTTAGATGAAAGTGATTATAACGAAAATAATTTACAAGC
AGAGTTGGGTATCAGATCGTTTTCAGATATTTATTGTGTAATCCCTTTTGTTCTCTACGGATCAAAATATTAACAATTTATTTTTGTTTTCAAATAAATT
AACTTCATTTCTAATGAAATATCATGAGCTTGTGAGTATCTATTTTTGTTTATGGACGTTTTAATATCACTATCACACTCTTGTTATGTTTGTCTTTTAC
TACTTCGTAGGTCTCTCTTCACCCACTCTCCCCTTTATCTTTTTTTTTATTACTTTACCTTTCTTATATATAAATCATCTGTATTTTCCCATTGTACTGT
GTATACGTAACACCTCTACTACAAAAGCATCAGACAAGTCCAGAATGACGGGTGCTTTACTCACTGTCATTTACTTTTTCCTTCTGCACACCCGTTTTTT
TTATATTTTTGTCTCAATTCTTTGTCTACTTCTTCTTATTTTTTTTTTTCCCCGATTTTTATACCTTCTATCATTAATACTCCAATTCATAAACCGTTAC
TATTGTATAAACACTTATATAA
>LE_HBa0127I13_SP6_59928 (trimmed for quality and cloning vector)
GGTAGAAGGACCATCTTTTTAGTTGATTGGGAAAAAATTCATGGAAAGGAAAAAATTCATTCGTTGTGATAGGAGTCATACTATATAGTAATAAATCTAG
TTAGCTATAAACACTAAAGTTATGACAGTGGGTGTCTTTTCAATTTTTTAAAATTTCTTGAAAATTTCAATTGTATTGGTGTATTTAATTGGATAAGAAG
TGTTGCAATTCAAGAATATGATATTATGATATGGCTATGTCCTACAATTAAAAGACTTCCAAATATATTGTTAACACAAAGATCATTCTAATGAAGAATA
TAGGCATTTAGATGAAAGTGATTATAACGAAAATAATTTAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.894125
Expected error %
1.08945
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0127I13
Clone
Clone name
hba-127i13
LE_HBa0127I13
C02HBa0127I13
P127I13
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found