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Clone Read LE_HBa0012D17_SP6_5936

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0012D17_SP6_5936
Primer
SP6
ID from Seq. Facility
LE_HBa_012_D17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
723 trimmed for vector and quality, 916 raw
Genbank Accession
Sequence
>LE_HBa0012D17_SP6_5936 (raw untrimmed)
AAATGACTTCCANTCATCTAGTTGACANANACNTACTANGGGTTAATGATAGGTTTAAGATATAACCATATATTAACTAATCATCGTTAAGTCATAAAAT
TATGTATAAGGATATTTGTCTTTGTATCTTAATGTTTGACATAAATATCGAGTGTGAGTGAGTAAAAACAAGTTTATATGAAAGGTCTAGTTAAAAAAAA
ATTCGTTATTAGTCGACCGCAACTCTTAACGTTGCATTAAGATATTGCCTCAATAAATTGTGGGTATAATATATGAATGTCATTTAATTTAGTCTAAACT
GACATTTATGTATAAATATACATTCAAATTTGTAAAAAATTGAACGAATAAATACATCGTTCTATGTGACATCCTACATGACAATTTTGTATCCTATGTG
GTGTTTTATGTATATTATGTTACGTTAGATGTATGTATCTACTTATACGGTTTTATAGCACAATCAAAGTTTAAATGTATAGATATTAGTTGAAATTAAA
TTTAAAAATATATTTACGTAAAACACCTAAAATGTAACTAATTTTTAACTCGAAAACGTGAAGTTGGAATCACTAGTAATTATGAATTAACAAGTGCAAC
TTATGTTGCAACTTCTAACTAACAGGTAGATTTTAAATTTATTAATTGACGGTATAAATAATATTTATATAATCAAATTATTTTTAAGTATTTAAAGGCA
ATTAATATAGTTTATTATAATTATACTAGATATGAGAATTCGTGCTAGCATGAATTCAATATATGTTGTTTTTTCAGTATCAATTTATGTAACACAGCTA
GAATTCAGAGAATCGTTCAAATCCTTATGTGATTTTTAAAAAACATAAAATTATAAATTATTAATTTATTATAAATTTTAAAGTACTTTTCCTTTAGAAT
ATTTTCAAAATAAAAA
>LE_HBa0012D17_SP6_5936 (trimmed for quality and cloning vector)
ATGATAGGTTTAAGATATAACCATATATTAACTAATCATCGTTAAGTCATAAAATTATGTATAAGGATATTTGTCTTTGTATCTTAATGTTTGACATAAA
TATCGAGTGTGAGTGAGTAAAAACAAGTTTATATGAAAGGTCTAGTTAAAAAAAAATTCGTTATTAGTCGACCGCAACTCTTAACGTTGCATTAAGATAT
TGCCTCAATAAATTGTGGGTATAATATATGAATGTCATTTAATTTAGTCTAAACTGACATTTATGTATAAATATACATTCAAATTTGTAAAAAATTGAAC
GAATAAATACATCGTTCTATGTGACATCCTACATGACAATTTTGTATCCTATGTGGTGTTTTATGTATATTATGTTACGTTAGATGTATGTATCTACTTA
TACGGTTTTATAGCACAATCAAAGTTTAAATGTATAGATATTAGTTGAAATTAAATTTAAAAATATATTTACGTAAAACACCTAAAATGTAACTAATTTT
TAACTCGAAAACGTGAAGTTGGAATCACTAGTAATTATGAATTAACAAGTGCAACTTATGTTGCAACTTCTAACTAACAGGTAGATTTTAAATTTATTAA
TTGACGGTATAAATAATATTTATATAATCAAATTATTTTTAAGTATTTAAAGGCAATTAATATAGTTTATTATAATTATACTAGATATGAGAATTCGTGC
TAGCATGAATTCAATATATGTTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.883282
Expected error %
0.239106
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0012D17
Clone
Clone name
hba-12d17
LE_HBa0012D17
C10HBa0012D17
P012D17
Clone type
BAC
Contamination
none
Estimated length
163,431
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found