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Clone Read LE_HBa0124L18_T7_59315

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0124L18_T7_59315
Primer
T7
ID from Seq. Facility
LE_HBa_124_L18-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
640 trimmed for vector and quality, 925 raw
Sequence
>LE_HBa0124L18_T7_59315 (raw untrimmed)
CCTAACCTGGTCCGGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTATGCCTCCAACAGTAGAAGGCTTTTGAGAAGAATTATCCAACCCATGA
TTTAGAGTTTGTTTCTGTAGAATTTCCCTTGAAAATATGGCGTCACAAATTTTACGGTGTTTATGTGGATGTCTTCAATGATCACAAGATCTTGCAATAT
GTGTTCACTCAAAGAGAGCTTAACCTCAGTCAAAAGTGGTGGTTAAAATTGCTCAAGGATTATTACATGATCATTCCTTCCACCCAGGTAAGGCTAATAT
TGTTGTTGATGTTTTAAGTAGGTTGTCTATTAGAAGTACCGTTCATCTTGAGGAAGAATAAAAGGAACTAGCACAAGAAGTGTATAGACTTGCACGCCTA
GGAGTCCAACTCATGGATTGCATAAAAAGAGGGATAGTGGTGACGAATGGGGTTGAGTTATCATTAGTGTCTAAAGTGAAAGAAAATCAAGACAAAGATC
CTATTTTTCTTGAATTGAAGGCAACTGTCCATAATAACGGAGATGATGAATTAATCAAGTTTTGGTACGTTTTGAAGTGTTACGATATGGGAGCAGGTTG
AAAATGCTAGTTCTTACTGTTTCATTATGATATGAATATACCCCATAAATAAAAGAATATTAACTTTTTGAACCAAGCGGAGATGGAGCACTGACATTTC
AATCACATTCTGAGCCCCTATGGAGTATTTATTCCTATAAATTATCTAGAATAATCTCTTAGCCGGTAAGTTCCATCCATCCTTGTCTCATCTCTCTTAA
TGCTTTGATGGTGAAATATTTTGGTATTTAATTAAAATTTATTCGATTATCTTTAACACTAATTCACAATTAACACTATTAATTTTCGTTCTTTAGTCTT
TTTTACATAGTTCTTTCTACTATCT
>LE_HBa0124L18_T7_59315 (trimmed for quality and cloning vector)
AGCTTATGCCTCCAACAGTAGAAGGCTTTTGAGAAGAATTATCCAACCCATGATTTAGAGTTTGTTTCTGTAGAATTTCCCTTGAAAATATGGCGTCACA
AATTTTACGGTGTTTATGTGGATGTCTTCAATGATCACAAGATCTTGCAATATGTGTTCACTCAAAGAGAGCTTAACCTCAGTCAAAAGTGGTGGTTAAA
ATTGCTCAAGGATTATTACATGATCATTCCTTCCACCCAGGTAAGGCTAATATTGTTGTTGATGTTTTAAGTAGGTTGTCTATTAGAAGTACCGTTCATC
TTGAGGAAGAATAAAAGGAACTAGCACAAGAAGTGTATAGACTTGCACGCCTAGGAGTCCAACTCATGGATTGCATAAAAAGAGGGATAGTGGTGACGAA
TGGGGTTGAGTTATCATTAGTGTCTAAAGTGAAAGAAAATCAAGACAAAGATCCTATTTTTCTTGAATTGAAGGCAACTGTCCATAATAACGGAGATGAT
GAATTAATCAAGTTTTGGTACGTTTTGAAGTGTTACGATATGGGAGCAGGTTGAAAATGCTAGTTCTTACTGTTTCATTATGATATGAATATACCCCATA
AATAAAAGAATATTAACTTTTTGAACCAAGCGGAGATGGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.948869
Expected error %
0.875091
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38790.1| Score 106 E Value 6e-45 Identity 59.50% Align. Length 469bp (73.28%) Frame 2
putative gag-pol polyprotein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38792.1| Score 106 E Value 6e-45 Identity 59.50% Align. Length 469bp (73.28%) Frame 2
putative gag-pol polyprotein [Solanum demissum] gb|AAT38791.1| putative gag-pol polyprotein [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0124L18
Clone
Clone name
hba-124l18
LE_HBa0124L18
P124L18
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found