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Clone Read LE_HBa0124I19_T7_59173

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0124I19_T7_59173
Primer
T7
ID from Seq. Facility
LE_HBa_124_I19-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
763 trimmed for vector and quality, 912 raw
Sequence
>LE_HBa0124I19_T7_59173 (raw untrimmed)
ATTAACCTGGTTCCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCAAAAGGTAGATTGATACTACCTTTGAGGACTTATAGGGAAAGAAA
ATCCTAGTGGGTATACCTTAGGGTGACGTAAAATGAAGATTTTAGTAAGAAAGTGAATATAAAATTTGTTAGTCCCTTCATTTTGATTACTCTATCTGAG
TTTAAGTGTCATGTCGAGGAAAAAAAATTTGACTTTGTGGTGATGAAAAGGGCTTACAAATACATGATGCTGATAGGAGTAAGTGATGGATGGTGACGGA
GATGCAAATTATAGAATACAAATTATTGGTCAAATAAATTTTATATGGTGATAAAAACTTGTGAGTATCTAAGGTTGATATTTCTACTATTTAGTGAGTA
ATGTGGTTGTAAGATATATTTTAAGAGATTTGGGTCCACATCAAGAATTATTTAGAGGAAAGGGAATCATGACTACAACAAGAGACAAGGTGCGAGCTGA
GGAAGTTTGATAACTAGAGCTTCCACATCAATAATGATTTCTGATAGAAGAAGATATCATATGTCACGAGATTTGGAAGAAAAGACAATATATCATTATT
TTGTAATAGGAATAATGGACCAGAGAGAAAATAAATCTTGATAAAGACAAGACAAGAAGAAAATCATATATCAAGAGAACTAGTATTAGAACGAGAAATT
ATGAACACCAGACGGCATATGCCCTGGATTTCCTTGTGAAATTGTAATTACAAATGAATAAACCAACGAAAAAAAAATAACTATAGGAGGAATTCTATTA
AAAATACATTTTAGAAATTTGCCGGAAATCATATATCACATTAGGGATAAAATGGTTAGAAAAGGGTTAAGACATACGCAATGGAAAGGTCAATTAACTA
TACTTGTCCAAA
>LE_HBa0124I19_T7_59173 (trimmed for quality and cloning vector)
AGCTTCAAAAGGTAGATTGATACTACCTTTGAGGACTTATAGGGAAAGAAAATCCTAGTGGGTATACCTTAGGGTGACGTAAAATGAAGATTTTAGTAAG
AAAGTGAATATAAAATTTGTTAGTCCCTTCATTTTGATTACTCTATCTGAGTTTAAGTGTCATGTCGAGGAAAAAAAATTTGACTTTGTGGTGATGAAAA
GGGCTTACAAATACATGATGCTGATAGGAGTAAGTGATGGATGGTGACGGAGATGCAAATTATAGAATACAAATTATTGGTCAAATAAATTTTATATGGT
GATAAAAACTTGTGAGTATCTAAGGTTGATATTTCTACTATTTAGTGAGTAATGTGGTTGTAAGATATATTTTAAGAGATTTGGGTCCACATCAAGAATT
ATTTAGAGGAAAGGGAATCATGACTACAACAAGAGACAAGGTGCGAGCTGAGGAAGTTTGATAACTAGAGCTTCCACATCAATAATGATTTCTGATAGAA
GAAGATATCATATGTCACGAGATTTGGAAGAAAAGACAATATATCATTATTTTGTAATAGGAATAATGGACCAGAGAGAAAATAAATCTTGATAAAGACA
AGACAAGAAGAAAATCATATATCAAGAGAACTAGTATTAGAACGAGAAATTATGAACACCAGACGGCATATGCCCTGGATTTCCTTGTGAAATTGTAATT
ACAAATGAATAAACCAACGAAAAAAAAATAACTATAGGAGGAATTCTATTAAAAATACATTTT

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.920075
Expected error %
3.84244
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0124I19
Clone
Clone name
hba-124i19
LE_HBa0124I19
C07HBa0124I19
P124I19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found