Clone Read LE_HBa0123J17_SP6_58448

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0123J17_SP6_58448
Primer
SP6
ID from Seq. Facility
LE_HBa_123_J17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
631 trimmed for vector and quality, 937 raw
Sequence
>LE_HBa0123J17_SP6_58448 (raw untrimmed)
CAGGAATTTTGAGCAATAGTAAGATATAGTGCATTCTTAAGCACAATATTATATCTTCTTAATTAGTGATATTGCACTTAACTTCTGATCTGATATCTAA
GAAGAACTATAACTTTTATGATCAAACAAGAATCAAGATCAACTTCAAGCATAATTTTACAATTTCCATCAACAACGAGCAGGAGCATCAAAGCATACCC
AACCGAAATCATTCTTCCGGTAAATGCTTTGGTGAAAGTCTTTTTATATTTATGCTCTTTGGTGTACTTGTTGAAGCTTTTCAAATTATGCAGAGATCAT
ACACATTGAAGCTTCAAATTCATTAGTTGCTTTTGTAACTACAACTAAACATAACTGAATATGAAGCTATTACCTTTGATCTGCCAGTGGATTTAAATCG
AACTTTGACATCCTAACCATGATAAAACAAAATAAAAAATAATGAAGTAAAAGAACATGGTGTTTGTTAAGGAAGTCATCTTTCTGCTTAAGATGTAATT
CCATGGTGTTTGGAATCACAGTATTATCAGTAGGTTCAAGTTTTAGCTTATTTGAAATTCGACTTCAAAATCAATAATATAGAGAAAGTTATTGCACCCA
TAAAATGGAAAAAGAAAATATTAATATCTCAAATCTGCTGCATAGAGAATGCTACAACCATTGCCTGAGTACTGTTCTGGTGCATGGAACACAGGGAGTT
GGAAAATCAATGAGAAATATGAAAGAATCAAAAGCACTTCCCAGCATCTCCTCCTGGATATTGTGTGGACGGTTTTGTGCGTGCCGTGGAGTGGGAGAAT
CGGGACGGATATAAGCATGGTATCCCCCACAGAAATAGCAGGGTTATACCGAGGGCTGGACTAGGCGTACAACTCTCTGGGCATAAGTTTTTCTATTTAT
GCCTTTCTGCTCTTGACAATCTATACAGAGAATGCTC
>LE_HBa0123J17_SP6_58448 (trimmed for quality and cloning vector)
AAGATATAGTGCATTCTTAAGCACAATATTATATCTTCTTAATTAGTGATATTGCACTTAACTTCTGATCTGATATCTAAGAAGAACTATAACTTTTATG
ATCAAACAAGAATCAAGATCAACTTCAAGCATAATTTTACAATTTCCATCAACAACGAGCAGGAGCATCAAAGCATACCCAACCGAAATCATTCTTCCGG
TAAATGCTTTGGTGAAAGTCTTTTTATATTTATGCTCTTTGGTGTACTTGTTGAAGCTTTTCAAATTATGCAGAGATCATACACATTGAAGCTTCAAATT
CATTAGTTGCTTTTGTAACTACAACTAAACATAACTGAATATGAAGCTATTACCTTTGATCTGCCAGTGGATTTAAATCGAACTTTGACATCCTAACCAT
GATAAAACAAAATAAAAAATAATGAAGTAAAAGAACATGGTGTTTGTTAAGGAAGTCATCTTTCTGCTTAAGATGTAATTCCATGGTGTTTGGAATCACA
GTATTATCAGTAGGTTCAAGTTTTAGCTTATTTGAAATTCGACTTCAAAATCAATAATATAGAGAAAGTTATTGCACCCATAAAATGGAAAAAGAAAATA
TTAATATCTCAAATCTGCTGCATAGAGAATG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.921177
Expected error %
0.22611
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0123J17
Clone
Clone name
hba-123j17
LE_HBa0123J17
P123J17
Clone type
BAC
Contamination
none
Estimated length
68,226
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found