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Clone Read LE_HBa0122G24_T7_57551

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0122G24_T7_57551
Primer
T7
ID from Seq. Facility
LE_HBa_122_G24-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
617 trimmed for vector and quality, 774 raw
Sequence
>LE_HBa0122G24_T7_57551 (raw untrimmed)
CGTGGGCCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTATTGTTCCGGGAGATTTTTCTCTAACTTTTTGGCAATCTAATCTTAAGGAC
AATCCTCATAAGACCCACCCGCTATCGTATCCAACACCCTTTATTATTATCATCCTGTCACCGATAGAAGTATTCCTTCAGTGACTCATCATCTATGCGG
TGATTAAGGACGCTTCTAAACAATGAGGTGAATCTATCCCAAGAACTAATAACTGACTCTGTTGGTAGTGCCACAAAGTTGTTCACTCTTTCATTATGGT
TATGTTTCTTGGAGACCGTGTAGTAACGTGCTAAGAAAACGACCCTTAATTGGTTCTAAGTGAAAATTGAGTTATAAGGGATTTCAGTGAACCAAATAGC
AGCTTTCCCGTCACTGAGAGAGGAAATACTCTTAGCCCTATTACATCCAAATCCAAATCAGGCATCCCTACACAGCTTTTACACACTTCCCTTACCTTAG
TTATATGGGCACGTAGATCCTCAGAAGGTAGCCCTGAAAATAAACCTCTGGTAGTGATCATTTGCATCAGGCTACTAGTTACCACAAAGGTGTGTCTTGG
TGGTACAAGGGGAAAGACAAGTGGTCCGGCTGAGTTTGCAATATTTCCATAGCCCTCTGTAGTATCCATGGAGAAGTGAAGATGGATTTTGTTCCTCTTA
TTGGGTTTTTTACCTCTATGATCGTGGAATTTCTCGACCCGGAATATTCACCGGGATCTTGTATTGCTCTGGGT
>LE_HBa0122G24_T7_57551 (trimmed for quality and cloning vector)
AGCTTTATTGTTCCGGGAGATTTTTCTCTAACTTTTTGGCAATCTAATCTTAAGGACAATCCTCATAAGACCCACCCGCTATCGTATCCAACACCCTTTA
TTATTATCATCCTGTCACCGATAGAAGTATTCCTTCAGTGACTCATCATCTATGCGGTGATTAAGGACGCTTCTAAACAATGAGGTGAATCTATCCCAAG
AACTAATAACTGACTCTGTTGGTAGTGCCACAAAGTTGTTCACTCTTTCATTATGGTTATGTTTCTTGGAGACCGTGTAGTAACGTGCTAAGAAAACGAC
CCTTAATTGGTTCTAAGTGAAAATTGAGTTATAAGGGATTTCAGTGAACCAAATAGCAGCTTTCCCGTCACTGAGAGAGGAAATACTCTTAGCCCTATTA
CATCCAAATCCAAATCAGGCATCCCTACACAGCTTTTACACACTTCCCTTACCTTAGTTATATGGGCACGTAGATCCTCAGAAGGTAGCCCTGAAAATAA
ACCTCTGGTAGTGATCATTTGCATCAGGCTACTAGTTACCACAAAGGTGTGTCTTGGTGGTACAAGGGGAAAGACAAGTGGTCCGGCTGAGTTTGCAATA
TTTCCATAGCCCTCTGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.981774
Expected error %
0.728198
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38730.1| Score 100 E Value 4e-29 Identity 54.50% Align. Length 475bp (76.99%) Frame 2
putative reverse transcriptase [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0122G24
Clone
Clone name
hba-122g24
LE_HBa0122G24
P122G24
Clone type
BAC
Contamination
none
Estimated length
128,331
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found