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Clone Read LE_HBa0101A07_T7_56461

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0101A07_T7_56461
Primer
T7
ID from Seq. Facility
LE_HBa_101_A07-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
370 trimmed for vector and quality, 817 raw
Sequence
>LE_HBa0101A07_T7_56461 (raw untrimmed)
GCTGGGGACCGCGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGGGAACCCATTTCAGCTTGAGTTGCCAGTAGGCAGACAAAGGAGTGATTAG
ATTGTAAGTGGTCTAGTATGGTAGACTTTGAATCTTTCTAACAAAGGACCTAGGAGCAGGAACAGAATTTTTCTTTGAAAATCTGTGAGTTCGGANAGGN
TNTGTAGGAGCAGGTNTNTNATTTGGTANATTTTGTNTTTTAGTATATTTAGAATATNTTTAATATGAGTTTNTTTAGTTAATATATTTATTTTTTAAAT
GTTGATTNTTATTATAATGTAGATATAATAGATTGTTGGATATAAATATATATTTATTGTGAGGATTATAAGGAGGATTTATGTATAGAATTNNTAGTTT
TTTATTATTGAAATTATTGTGATTCGTGATATTATGATAGTAATTTTGAGGATTTTTGATTATTTATTAGTATTCTGCCCGGGGGGGGCTTTTTTTTTTT
TTTTCCTGGGGNGTGNTGTTTGTGTNTTTTTGTTTTTTTGTGTTTTTTTGTTGTGTTTGGGTGTTTTTTGTGTGTTGGTGGTTTTCTTTTTTTTTTTTTT
TCCGGGGNGNGNGNNGGNNGGGNGGGGGNGGGGGGGGGGGGGTGGGGTGACCGGNGGGGGGGGGGGGGGGGGGGGTGGTGGGGGGGGGGGTTTGTTTGTT
TTTTGTTGTTTTTGGGGGTTTTCTTCCCGNNCTTTTCGNGGNGGGGNGGGGNGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGTTGGGGGGGCTTT
TTTTTTTTTTTTTTTTT
>LE_HBa0101A07_T7_56461 (trimmed for quality and cloning vector)
AGCTTGGGAACCCATTTCAGCTTGAGTTGCCAGTAGGCAGACAAAGGAGTGATTAGATTGTAAGTGGTCTAGTATGGTAGACTTTGAATCTTTCTAACAA
AGGACCTAGGAGCAGGAACAGAATTTTTCTTTGAAAATCTGTGAGTTCGGANAGGNTNTGTAGGAGCAGGTNTNTNATTTGGTANATTTTGTNTTTTAGT
ATATTTAGAATATNTTTAATATGAGTTTNTTTAGTTAATATATTTATTTTTTAAATGTTGATTNTTATTATAATGTAGATATAATAGATTGTTGGATATA
AATATATATTTATTGTGAGGATTATAAGGAGGATTTATGTATAGAATTNNTAGTTTTTTATTATTGAAAT

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.944403
Expected error %
10.0146
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0101A07
Clone
Clone name
hba-101a7
LE_HBa0101A07
P101A07
Clone type
BAC
Contamination
none
Estimated length
130,171
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found