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Clone Read LE_HBa0088B11_SP6_55748

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0088B11_SP6_55748
Primer
SP6
ID from Seq. Facility
LE_HBa_088_B11-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
723 trimmed for vector and quality, 904 raw
Sequence
>LE_HBa0088B11_SP6_55748 (raw untrimmed)
CCAAGGAATGCAGTCTTTAATTGACTTTAATAATTGTAATATTTTTAGAATAATACATCTCTATTAAATTTAGACTAATTTAGACTTATATGACGTAATA
TGTACATTAGTAATTGAGGATCAAATAAAAGAGGGAGAACAATTGTAATTAATTTAATGAATTTAAATTATTTCATTGTAACAAGGAAATAGTAAAAAAC
AAAATTATTATTATGAACAAATAAAAATAAAAATTCAAGCACATAATAATTTAAAAAAAATAGAATAGCAAAAAAATTACTAACATGATGTGGAGATTCG
AGATGTCAAATAAGAATAATTGATGAACAAGAACAAGAGAAAATTGAACAAACCCAAAAGTCACAAATATACAAATATAAGGAATTAACGAGTCTAACGC
TATTTTTATTTAACTATAATTCTAATTGATAATGAACTCAAAAGATTTTGAGTTTTATTTTAATTCTAAAAAATAGTTAAATTTCAAATGAATTAGGGTG
GGTCGCTAGGTTTTTTTTTTTATGAAGGGGACCTATTATTTCGAATTTAAACAAAAATTAATATATTTAAGAAAAGAAAAAAAGAAATTCCCGTAAGGAA
TCAAAGATGGGAACATTCTATTACAAGCAGTGTTCTTTTAATTGTTTTAGCGTTTATCTTTTCATTTTTTATATAGATATATTTTGTAAAAAAATTTAAT
ATAGCCGTGTCACGTGATACACTTTAGGTATAAATATATTTTCCCCTGCTAATTAGGTAGGAAAATAACATTGATATAACACGAATGTGATACACCTCTC
ATTGTGGTGCTTTTTGTTTGAAAAAATAAAATTTCCTTTTGAAACATATAAATATGTATAATTCCCCTAATAATTAAAAATGTTTGAGATAAATTTTAAA
ATAA
>LE_HBa0088B11_SP6_55748 (trimmed for quality and cloning vector)
TTGACTTTAATAATTGTAATATTTTTAGAATAATACATCTCTATTAAATTTAGACTAATTTAGACTTATATGACGTAATATGTACATTAGTAATTGAGGA
TCAAATAAAAGAGGGAGAACAATTGTAATTAATTTAATGAATTTAAATTATTTCATTGTAACAAGGAAATAGTAAAAAACAAAATTATTATTATGAACAA
ATAAAAATAAAAATTCAAGCACATAATAATTTAAAAAAAATAGAATAGCAAAAAAATTACTAACATGATGTGGAGATTCGAGATGTCAAATAAGAATAAT
TGATGAACAAGAACAAGAGAAAATTGAACAAACCCAAAAGTCACAAATATACAAATATAAGGAATTAACGAGTCTAACGCTATTTTTATTTAACTATAAT
TCTAATTGATAATGAACTCAAAAGATTTTGAGTTTTATTTTAATTCTAAAAAATAGTTAAATTTCAAATGAATTAGGGTGGGTCGCTAGGTTTTTTTTTT
TATGAAGGGGACCTATTATTTCGAATTTAAACAAAAATTAATATATTTAAGAAAAGAAAAAAAGAAATTCCCGTAAGGAATCAAAGATGGGAACATTCTA
TTACAAGCAGTGTTCTTTTAATTGTTTTAGCGTTTATCTTTTCATTTTTTATATAGATATATTTTGTAAAAAAATTTAATATAGCCGTGTCACGTGATAC
ACTTTAGGTATAAATATATTTTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.864087
Expected error %
0.0864781
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0088B11
Clone
Clone name
hba-88b11
LE_HBa0088B11
P088B11
Clone type
BAC
Contamination
none
Estimated length
20,064
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found