Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0011E16_T7_5487

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0011E16_T7_5487
Primer
T7
ID from Seq. Facility
LE_HBa_011_E16-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
825 trimmed for vector and quality, 993 raw
Genbank Accession
DU025132
Sequence
>LE_HBa0011E16_T7_5487 (raw untrimmed)
TGAAAGCTGGTCCCGGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTTGTCTATTGTCACTCCGATACTTTTGAGGTACGCGTATTTACGAAA
TTAAAGGATCTAAGAGCATTTGTATTACCACGCGTATTAATATTTTACATGTTAATTAAGTTAATAGTTGTCTTTAATTGAAAAAAGAATTATAAGGAAA
AATAATTATTCTAAGAAGAAGAAAAATTTTCAAATAATAATATTATACGAGACTTTATTTATTAATAAGAAACAAAAGGATTTTAGCGGTAGGTCATCAA
TTTTTTAATTATTATTATTATTGTTATTATTTTTATTACCAATTTCATTTTTCAAGAGAAGCCATTTTCCTAACAACTTAACTTTTAAATGTGTTATTAT
TAAATAGTTAATATATTATTATTATTATTATTATTATTATTATTATATCTAATATATGCAATATGTTTTTTGAATTAATATTTTATACTTACCAACCAAA
CACGTGACAAATTATACTTCAATAAATATCTTTTGTTACCAAATAATATCCTCTATTACAAGAGTATCACATGGCATCAACCTCAGTTTGCTTAAACATT
GTATGACATTATCAACATATAAATGGTGCAAAGAAATAATTTGAAATATATACACATATAATATGATCACGTTCAGTTTGAACTCACTGACTATAAATAC
GCCTAATGGTACTTTCAGATCAAAACGAACAAGATTTGTTATATATCTAAGTTAGCTAACTTTAATCGTACCGCGTCCTCTCTCCATTTGTGTCTGGAGT
TTCTCTTTAGCATGCCTTAGTGCATCAAGAACTTCTCTAACAGTAGCATCAAGAACAATTGGATCAATTGATTTGGCTTTGGCCAATCTAAAGGAACTAA
TGCCAAAGAGCATTGACATTGTCTTTCTTCCTTTTTTCTTCTTCTGGACTATAAACTTTGAGCTAAAAAAAAAAAAAATTGAAACAATGTTAT
>LE_HBa0011E16_T7_5487 (trimmed for quality and cloning vector)
AGCTTTTGTCTATTGTCACTCCGATACTTTTGAGGTACGCGTATTTACGAAATTAAAGGATCTAAGAGCATTTGTATTACCACGCGTATTAATATTTTAC
ATGTTAATTAAGTTAATAGTTGTCTTTAATTGAAAAAAGAATTATAAGGAAAAATAATTATTCTAAGAAGAAGAAAAATTTTCAAATAATAATATTATAC
GAGACTTTATTTATTAATAAGAAACAAAAGGATTTTAGCGGTAGGTCATCAATTTTTTAATTATTATTATTATTGTTATTATTTTTATTACCAATTTCAT
TTTTCAAGAGAAGCCATTTTCCTAACAACTTAACTTTTAAATGTGTTATTATTAAATAGTTAATATATTATTATTATTATTATTATTATTATTATTATAT
CTAATATATGCAATATGTTTTTTGAATTAATATTTTATACTTACCAACCAAACACGTGACAAATTATACTTCAATAAATATCTTTTGTTACCAAATAATA
TCCTCTATTACAAGAGTATCACATGGCATCAACCTCAGTTTGCTTAAACATTGTATGACATTATCAACATATAAATGGTGCAAAGAAATAATTTGAAATA
TATACACATATAATATGATCACGTTCAGTTTGAACTCACTGACTATAAATACGCCTAATGGTACTTTCAGATCAAAACGAACAAGATTTGTTATATATCT
AAGTTAGCTAACTTTAATCGTACCGCGTCCTCTCTCCATTTGTGTCTGGAGTTTCTCTTTAGCATGCCTTAGTGCATCAAGAACTTCTCTAACAGTAGCA
TCAAGAACAATTGGATCAATTGATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.906967
Expected error %
0.817167
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0011E16
Clone
Clone name
hba-11e16
LE_HBa0011E16
C10HBa0011E16
P011E16
Clone type
BAC
Contamination
none
Estimated length
132,527
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found